Rhopalosiphum maidis (corn leaf aphid): 113548012
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Entry
113548012 CDS
T06065
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113548012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmd03032
]
113548012
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113548012
DNA replication proteins [BR:
rmd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113548012
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113548012
BRCA1-C complex
113548012
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
BRCT
PTCB-BRCT
RTT107_BRCT_5
Vps27_GAT-like
Vma12
Motif
Other DBs
NCBI-GeneID:
113548012
NCBI-ProteinID:
XP_026804446
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All DBs
Position
1:53749112..53754577
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AA seq
683 aa
AA seq
DB search
MDCGKQNDTLLSIPTLINVKTQDCYDVLMKKTHLIGRAGFGADLEISDDTSISRCHAHLI
LVKKAFGSKMKLFLTLEDKKSKYGTYINDFDERIISECPRILKFGDKIRFGIMDSIWTVV
KYPLIVCPSTLKMADKEILKNLMEKIGGQVSRDWSEKCSHLCMNTVTVTEKVLLCLASAK
SIVLLKYFIDLYKALLPDSLSELPFCVDYKPKLVESLLNPNSLSLDVNNKRKNIFSGKTF
ICSTVNQLNRISKLVKLAGGEIINYSDRILSDDDILSCTKYILMQQDSQSMEVDYTYQRI
LEKLKITNKRSIPENDIGFAIIFSSTVKHCNANYNISLVNLDSQPNVIKSQESIILAPET
EVLTVNDSQMFSVNTIPDSLANTQGAFKRPLEVVNDSEEIILPPKRSSSAVNEEKINNMK
TIRVEEDLQLFQRVIEPTPSCSNHNVQHPASKTSNLTPTVDDKVYTNDNLCLTTVPNSIY
TSNTKELSNWFQGTITENSVDNLPPKATENRIVPTKRKISNDFAMFNDENEDPFNYMDID
EIEEHPKKKPKKRDMDSIFFPIVDMSSKNKNEPSKTVETDINVAVDPNFIMNLLSEAKGT
GQFIDASILPDKSSTNTHEDSENDFLLNSVIVETVSMVVSRPTQITKYNQENNTHLKNFK
KFKKKGPTMRIPYIVPMEYSQID
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggactgtggtaaacagaacgatactctgttatccataccgacgttaattaatgtaaaa
acgcaggattgctatgatgtattgatgaaaaagactcacctgatcggtcgcgctggtttt
ggtgctgatctggaaatatcggacgatacatccattagccgttgtcatgcacatctcatt
cttgtcaaaaaagcatttggtagtaaaatgaaactgtttttgactcttgaagacaagaaa
tctaaatatggaacatatattaatgattttgatgaacgaattataagtgaatgtcctaga
attttaaagtttggcgataaaattcgttttggcataatggatagcatttggactgttgtt
aaatatcctttaattgtttgtccatcaacattgaaaatggctgataaagaaatactgaaa
aatctaatggaaaaaattggaggacaagtatcacgtgattggtccgaaaagtgttcacac
ctctgtatgaatactgttactgttacagaaaaggtgttattatgtttagcatctgcaaaa
tcaatagtactcttgaagtattttattgatttatataaagcattattacctgattcattg
tcagaattaccattctgtgtggattacaaacctaaattggtcgaaagtcttttaaaccca
aattcattgtcattagatgtgaataacaaacgtaaaaatatattttctggaaaaacattt
atatgttctacagttaatcaattaaatcgtatttcaaaattagtaaaattagcaggcggg
gaaataataaattattcagatagaattttatcagacgatgatatcttaagctgtacaaaa
tatattctaatgcaacaagattcacaaagtatggaagttgattatacataccaacggatt
ctggaaaaacttaagataacaaacaaaagatcaataccagaaaatgatattggatttgcc
attattttttcaagtactgtaaaacattgtaatgccaattacaatatttctttagttaat
cttgattctcaacccaatgtaattaaatcacaagagtctattattttagctcctgaaact
gaggttttaactgttaatgatagtcaaatgttttcagttaataccataccagattctctt
gcaaatacacagggtgcctttaaaagaccattagaagtggtaaatgattctgaagaaata
atattaccaccaaaacgttcctcatcagcagtcaatgaagaaaaaatcaacaatatgaaa
acaataagagttgaagaagatttacaactgtttcaacgagtgattgaaccaactccatca
tgtagtaaccataatgtgcaacatcctgcatctaaaacttctaacctaactcctacagtt
gatgataaagtatatacaaatgataatttgtgtttaactacagtaccaaactcaatctac
acttccaacaccaaagaattgtcaaattggtttcaaggcactataactgaaaatagtgta
gacaatttacctccgaaggctactgaaaaccggattgttcctaccaaaagaaagatatca
aatgattttgctatgtttaatgacgaaaatgaagacccattcaactatatggacatcgat
gaaattgaagaacatcccaaaaaaaagccaaagaaaagagatatggattcaatatttttt
cctattgttgacatgtcatctaaaaataaaaatgaaccgtctaaaactgtggagactgat
atcaatgtcgcagtagatccaaatttcataatgaatttactctctgaggctaaaggtact
ggacagtttatagatgcgagtatactccctgataaatcgtctactaatacacatgaagat
tccgaaaatgatttcttattaaattctgtcattgtggaaactgttagcatggtggtgtcc
agacctacacaaattacaaaatacaatcaagaaaataacactcatcttaaaaatttcaag
aaattcaaaaagaaaggaccaactatgcggattccatatattgttccaatggaatactca
caaatcgactaa
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