Rhopalosiphum maidis (corn leaf aphid): 113551276
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Entry
113551276 CDS
T06065
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113551276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113551276
Ion channels [BR:
rmd04040
]
Ligand-gated channels
GABA-A
113551276
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113551276
NCBI-ProteinID:
XP_026809232
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Position
2:89253131..89309754
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AA seq
553 aa
AA seq
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MTGRAAHTVSATAWLVACVAFMAPMAPPDAHAATPGGGGGMFGDVNISAILDSFSLSYDK
RVRPNYGGTPIEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFTKRQGVETLSV
GSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYF
PMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTG
NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT
LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFLAIQKIA
EQKKGGHDAHAHLHQQQRSGHGNMSAHGSMSGHNTLSGHNTLSHGLSGHGLPPSHGTMGG
YGGHDSHPRHSHGGHSGHGGQMLSGDMDHLPRQANVRFKAHDSKNYLKGGSLENTINGRG
DDDCNITPLQPQHVMHPNKDINKLYGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISD
VVADDLVLLEADK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccgcgccgcgcacacggtgtccgcgacggcatggctcgtggcctgcgtcgcc
tttatggcgccgatggcgccgccggacgcgcacgccgcgaccccaggcggcggcggtggt
atgttcggtgacgtaaacatatcggcgatactcgattcgtttagtctgagctatgacaaa
agagtaagaccaaactacggaggtacgccaattgaagtcggtgtcaccatgtacgtgttg
agcatcagctctttgtcagaagtcaaaatggacttcacgttagatttctacttcagacaa
ttctggaccgatccccgattggcgttcaccaagcggcagggtgtcgagaccctgtccgtg
ggatcggagttcataaaaaacatctgggtgcccgacacgttcttcgtcaacgagaaacag
tcgtacttccacattgcgaccaccagcaacgaattcatccggatacaccattcaggaagc
ataacgcggagtattcgtttgacgatcacagcgtcgtgtcccatgaacctgcagtacttc
ccgatggaccgacagctgtgtcacatcgaaatcgagagctttggttatacgatgagagac
atccggtataagtggaatgagggaccaaactcggtgggcgtatccaacgaagtgtccctg
cctcagtttaaagtgctgggacatcggcagagagctatggaaattagcctgacaacaggt
aactattcgagactggcttgcgagatccaattcgtgcgatccatgggctactacctgatc
cagatctacatacccagcggactgatcgtcatcatatcctgggtgagtttttggctgaac
cggaacgctacgccggccagagtggcgttaggcgtcaccaccgtgttgaccatgaccacg
ctcatgtcgtccacgaacgcggcgctgccgaagatatcgtacgttaaatctatcgacgtc
tacttgggcacgtgtttcgtcatggtgttcgcttcgctgttggaatacgccaccgtcggg
tacatggcaaagaggatacagatgaggaaaaatcgttttctggccatacagaaaatcgct
gaacagaagaagggtggccacgacgcacacgcgcacttgcatcaacagcagcgctccggc
catggtaacatgtccgcccacggttcgatgtccggccacaatacgctatccggccacaac
acgttatcgcacggcttgtctggtcatggcttaccaccttcccacggtacgatgggcgga
tatggtggacacgacagccaccctcggcacagtcacggcggccatagtggtcacggcggc
caaatgctctctggggacatggaccacctgcccagacaagctaatgtacgcttcaaagct
catgattcaaagaactacctcaagggcgggtcgctggaaaacaccatcaacggccgcggg
gacgacgactgcaacatcactccgttgcagccgcagcacgtcatgcatcccaacaaggac
atcaataagctgtacggaattacgcccagtgacattgacaagtattcgagaatcgtgttt
ccggtgtgcttcgtgtgcttcaatctaatgtactggatcatctacctacacatcagtgac
gtagtggccgacgacctggtgctgctcgaagcggacaagtag
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