Rhopalosiphum maidis (corn leaf aphid): 113551572
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Entry
113551572 CDS
T06065
Name
(RefSeq) eukaryotic initiation factor 4A-like
KO
K03257
translation initiation factor 4A
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113551572
03012 Translation factors [BR:
rmd03012
]
113551572
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113551572
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113551572
mRNA cycle factors
Stress granule specific factors
113551572
Translation factors [BR:
rmd03012
]
Eukaryotic type
Initiation factors
eIF-4
113551572
Exosome [BR:
rmd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113551572
Exosomal proteins of bladder cancer cells
113551572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_22
AAA_19
AAA_11
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
113551572
NCBI-ProteinID:
XP_026809679
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All DBs
Position
2:76883154..76895598
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AA seq
722 aa
AA seq
DB search
MDAQLTCKSNQKEVVYNFDEMGLKAELLRGIYVYGFEKPSAIQQRTILPCINGHDVIVQA
QSGTGKTTSVLISILQNTVTSLNECQALILVPSRKLAQQIEKVIMAFGDFMKIDCHAWIG
GKNICNNIRKLDSFPHVVVGTPGCVSALIAKKTLKTQFIKTIVLDEADRLLTSDKVEIKN
LFKFFKEDIQVILLSKLMSQDVLDKSTHIVNSPLHILEQNEELELDAIKQFYIKLTNKNE
AIIRKHSEINDYSGSLSINIGGRIKSDWKEVVENFHDMNLKEELLSGIYGYGFEKPSAIQ
KHAILPCINGHDVIVQAQYGTGKTTSVLISILQQIDPSLNKCQALILVPTRDLALQIQKM
LIALGEFLKANCHACIGGTDIHDDSRELQMGPHVVVGTLGRVYDMIARNSLQTKFIKTFV
LDKADKLLLDLGFKDKIRVIFKYFKEDVQIILLSVPMPKDTLDMNTHFLRNPVCIFMKKE
ELILEGIKHFFIYFTDIKWVFDTLCSLCNTLNITQVVIFCNTYHKVESLTNNMRLKAFNV
SIMHERMDQIQRQSTLYNFCSGTSPVLITTHLLAQTIDVQVSSVINYDLPPNHEHFIRWI
DRSFCFDRKGVVVNFITKDNRLAMSAIRPFFNTHVIKIKNPIHTSLIQPIADYMNQTSSQ
PAPIPKEPPIHNSDGAQLATNHCNISCDNQPDRLDEYCRNDDSSSGDSNRYVHTSNNSYK
IE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccaattaacttgtaagtctaaccagaaagaagtggtgtataactttgatgag
atgggtttgaaagcagagttattgcgtggtatttatgtatatggttttgaaaagccatca
gctattcaacagcgcaccattttgccatgtatcaatggtcatgatgttattgttcaggct
caatctgggactgggaagacaacttctgttttgatttccattctccaaaatactgtcaca
agtttgaacgagtgtcaagcactcattttggtaccatcacgtaaattggctcaacagatt
gaaaaggtgattatggcttttggtgactttatgaaaatagattgtcatgcttggattggt
ggaaaaaatatttgtaataatatacgtaagctagatagttttccccatgtagtagttggc
actcctggctgtgtgtctgctttaattgctaaaaagacattaaaaactcaatttatcaag
acaattgtgttagacgaagctgatagactattgactagtgacaaagttgaaataaaaaat
ttgtttaagttttttaaagaagatattcaagtcattttgttatctaaactaatgtctcag
gatgttttggacaagagcactcacattgtgaatagtcctttacacattcttgaacagaat
gaagaactggaattggatgctattaaacagttttacatcaagcttacaaataaaaatgag
gcaataattagaaaacatagtgaaattaatgattactcaggatcactcagtataaatatt
ggtggaagaattaagtctgactggaaggaagtggtggaaaactttcatgacatgaattta
aaagaagagttgttgagtggcatctatggatatggttttgaaaagccatctgctattcaa
aagcatgccattttgccatgcatcaatgggcatgatgtcattgttcaggctcaatatggt
actggtaaaacaacttctgttttgatatctattcttcaacaaattgatccaagtttaaac
aagtgccaagcactcattttggttccgacccgtgatttggctcttcagattcaaaaaatg
cttattgctttgggtgaattcttgaaagcaaactgtcatgcttgtattggtgggacagac
attcatgatgatagtcgtgaattgcaaatgggaccccatgtagtggttggcactcttggg
cgtgtttatgatatgatagctagaaactcgctacaaactaaatttatcaagacatttgtg
ttagacaaagctgataaattattgcttgatcttggtttcaaagataaaattagagttata
tttaagtacttcaaagaagatgttcagataattttgttgtccgttccaatgcccaaggat
actttggatatgaacactcatttcttgcgtaatcctgtatgtatttttatgaaaaaagaa
gaactaatattagaaggtataaaacatttttttatctacttcaccgacataaaatgggta
tttgacactttatgtagtttgtgtaatactctaaatatcacccaggttgtgatattttgc
aatacgtatcataaggttgagtcattgactaataatatgcgtttaaaagcattcaatgta
tcgattatgcatgaaagaatggatcaaattcaacgtcagagtactttgtataatttctgt
tctggtactagtcctgtactaatcaccactcatttattggctcaaaccattgatgtacaa
gtgtcttcggttatcaactatgatttgccgcccaatcatgaacattttattcgctggatt
gatcgttcattctgttttgatcgtaagggagttgtcgttaatttcatcactaaagacaac
agactagcaatgagtgctattcgaccttttttcaacactcatgtgattaagataaaaaat
ccaattcatacttctcttattcagccaattgctgactatatgaaccaaacttcttcacaa
cctgcaccaatacccaaagaacctcctattcataacagtgatggtgctcaactagcaaca
aatcattgtaacataagttgtgataaccagccagatcggttagatgaatattgtagaaat
gatgattcgagtagtggagatagtaatagatatgttcatacatcaaacaattcatacaaa
attgagtaa
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