Rhopalosiphum maidis (corn leaf aphid): 113552004
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Entry
113552004 CDS
T06065
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113552004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113552004
03012 Translation factors [BR:
rmd03012
]
113552004
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113552004
Translation factors [BR:
rmd03012
]
Eukaryotic type
Release factors
113552004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
113552004
NCBI-ProteinID:
XP_026810443
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Position
2:72334435..72341447
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AA seq
440 aa
AA seq
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MTTNGEETTSDRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEYGT
ASNIKSRVNRLSVLGAITSVQQRLKLYTKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFK
PINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPK
KHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQ
SDMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDT
GKYCFGVEDTLKALELGSVETLICWENLDIQRYVLKNHTTAEEKILHLTPEQEKDKTHFT
ERDTGVELELVECQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVD
FQSMQCDDLDPNELYDIDDY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacggcgaagagaccacttcggatcgcaacgtagagatatggaagatcaag
aagctcatcaagagtctggaaatggccagaggtaatggaacaagtatgatatcattaatc
atacctcccaaggatcagatttctagagtgagtaaaatgttggctgatgaatatggtact
gcttcaaacatcaagtcacgtgtaaacagattatcagtattgggtgctattacatcggta
cagcaaagattaaaactttacactaaagttccacctaatggattagtagtgtattgtgga
accattgtgactgaagaaggtaaagaaaagaaagtcaatattgattttgagccattcaaa
cccattaatacttctttgtacctttgtgataataagtttcatacagaagcactaacagca
ctattagcagatgacaataaatttggtttcattgtgatggatggtaatggtgcattgttt
ggtacattgcaaggaaacaccagagaggttcttcataaatttacagttgacttaccgaaa
aagcacggtagaggaggtcaatctgccttacgttttgctcgtttacgtatggaaaaacga
cacaattatgtacgcaaagtagcagaagtagctactcagctatttattacaaatgacaaa
cctaatatagctggattaatattggctggtagtgcagactttaaaacagaacttagtcaa
tctgatatgtttgatcctcggttacaagctaaaattattaaattagttgatgtatcttat
ggcggtgaaaacggttttaatcaggcaattgaattagctgccgaatcattacaaaatgtt
aaatttattcaagaaaaaaaattaataggacgatattttgatgagatcagtcaagataca
ggaaaatattgttttggtgttgaggatactttaaaagctctagaacttggatctgtagaa
acattaatatgttgggagaacctagacattcaaagatatgtcctaaaaaaccacacaaca
gctgaagaaaaaatattacatttgactccagaacaagaaaaagataaaacacattttaca
gaaagagatactggagtagaattggaattagtcgagtgtcagccacttttggaatggttg
gcaaataattataaaatgtttggagctaccttagaaataatcacagataaatcacaagaa
ggatcacaatttgttagaggatttggtggcataggaggattattacgttataaagttgat
ttccaaagtatgcagtgtgacgatttggatccaaatgaactttatgatattgacgattat
tag
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