Rhopalosiphum maidis (corn leaf aphid): 113553342
Help
Entry
113553342 CDS
T06065
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113553342
09123 Folding, sorting and degradation
03018 RNA degradation
113553342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113553342
03041 Spliceosome [BR:
rmd03041
]
113553342
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113553342
mRNA degradation factors
5'-3' decay
Lsm complex
113553342
Spliceosome [BR:
rmd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113553342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
113553342
NCBI-ProteinID:
XP_026812440
LinkDB
All DBs
Position
2:3742033..3744091
Genome browser
AA seq
134 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRFWRLPECY
IRGSMIKYLRIPDEIFDMVKEDIVVNKARGRTDNQKNRAPRGARQGFGGRGGGGNNRGTG
PQQQRGGPNKFRGK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctttcattactcaaaactgctcagaatcacccgatgctggttgaattgaaa
aatggtgaaacatacaatggacatttagttacatgcgatagttggatgaatatcaattta
cgagaagttatctgcacatcgaaagacggagatagattttggagactcccggaatgttat
atcagaggtagtatgattaaatacttaagaataccagatgaaatatttgatatggtaaaa
gaagatatagttgtaaacaaagctcgtggtcgaacagataaccagaaaaatcgtgctcct
agaggagctagacaaggttttggaggtagaggaggcggtggtaacaaccgtggtactgga
ccacagcaacagagaggtggcccaaataagtttagaggaaaataa
DBGET
integrated database retrieval system
