KEGG   Rhopalosiphum maidis (corn leaf aphid): 113553994
Entry
113553994         CDS       T06065                                 
Name
(RefSeq) TAR DNA-binding protein 43-like
  KO
K23600  TAR DNA-binding protein 43
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113553994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmd03019]
    113553994
Messenger RNA biogenesis [BR:rmd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     113553994
SSDB
Motif
Pfam: RRM_1 TDP-43_N RRM_7 RRM_PARP14_3 Nup35_RRM_2 WD-like_fungi Itf52_C
Other DBs
NCBI-GeneID: 113553994
NCBI-ProteinID: XP_026813418
LinkDB
Position
2:complement(37466753..37470682)
AA seq 403 aa
MSFVQVSETNDNDKEVVDLPLEKDGTLLLSTLHAQYPDACGLKYVAPDNGRTRALRLVDD
KLHPPTDDGWGDIVYFCSFNKDNGQKRKLNEEFESDVERASKEPKSEATSTAWKNRDLLV
LGLPWKTTDEDLESYFSKYGELRMAQIKKTTDGRSRGFGFIRFKEQESQVRSMLDSHVIN
GRRCEIKIPNIKDAFINEAPKKIFVGQLTESITQEDLEDYFKKFGDIVEVFVPRPFKGIA
FVSFTKPDAALTALDQDHTIKDIRLSVSVAMPKDKDQRSRGGRSSGGGGGSGGNPYGGNP
YSGRMRGSRDSYNSRDHYYDNGGWDDYDRGSYSDRYRNSRYDRKPYDSGRSYNSGQVWRK
NEYSDSSSVSQSKDVSGQFDPNLVAAVVEKTVRGVIGNMSKYE
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgtcgttcgtccaagtatctgaaacaaatgacaatgataaagaggtggtggacttgccg
ttggaaaaagatggcaccctcttattgtctactcttcatgcacaatatccggatgcttgc
ggcttgaagtatgtagcaccggataacggccgaacccgagctcttcggcttgtcgatgat
aaactacatccacctactgatgatgggtggggcgacattgtatacttttgttcgttcaac
aaggataatggacagaaaaggaaattgaacgaagaatttgaaagtgatgttgagcgagca
tccaaggaacccaagtctgaggcaacatcaacggcttggaagaatcgagatttacttgtg
ctcggtttaccatggaaaacgactgatgaggacttagaaagttactttagtaaatacggt
gaactgcgcatggcacaaattaaaaagacaactgacggtagatctagaggttttggattc
atacgatttaaagaacaagaatctcaagtgcggtcaatgttagattctcatgtaataaac
ggaaggcgatgtgagattaaaatacctaacattaaggatgcatttataaatgaagcgccg
aagaaaatatttgttggtcaactgactgaaagtataactcaagaagatttagaagactat
tttaaaaaatttggagatattgttgaagtctttgttcctcgtccatttaaaggcattgcc
tttgtatcatttaccaaacctgatgctgcactcactgctcttgaccaggatcataccatc
aaagatattcgtctcagtgtgtctgttgctatgcctaaagataaagaccagaggtcacgt
ggtggacgtagtagtggcggcggtggcggaagtggtggtaacccctatggtggtaacccc
tatagtggtcgtatgagaggaagtcgagattcctacaatagtcgtgatcactactatgat
aatggtggttgggacgattatgaccgtggtagttattcagaccgctatagaaatagtcga
tatgatagaaaaccatacgatagtggccggtcatacaactcagggcaagtatggagaaaa
aatgaatactccgattcatcatctgtatctcaatctaaagatgtgagtggccagtttgat
ccaaatttagttgctgcagtagtagaaaagacagtgagaggagtaattggaaatatgagc
aaatatgaataa

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