Rhopalosiphum maidis (corn leaf aphid): 113558140
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Entry
113558140 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113558140
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113558140
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
113558140
NCBI-ProteinID:
XP_026819448
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Position
3:complement(55064944..55083024)
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AA seq
614 aa
AA seq
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MPLSHLLCETMDRIPPQYDYYNTTDEPWLSDNMPITNESSSGSDELYSTFTTPVSPIEQS
TSLNAIKLMDKLNEQCSKERNKCENYVLPSSSSMSFTDADSLHPLSAHSRFQLSDMPIEL
QPEKSLEKRSWFFLAWVTSLDFIIEPQSLCYVAWLSLVTMCYLYNCWVIPLRITFPYQTP
ENLWKWMLLDYCTDAINLLDTFVIKPRIMYLKDGFWVRDLKLIEVNYLEKLQSKLDIISL
LPADLICLTPGFTSEMLPLMRLNRIIKIQTFWEFFDHFDSVLSSPYVVRVTRTLTYMVYL
VHLNACAYYYVSVKEGLATNNWVFNGQGNAYIRCFFFATKTATSIGKNPHPENEAEYLFM
TASWLMGVFVFAILIGQIRDIIATATRSQTEYRKLQDETLEYLRKLNIPPRIRERVEQWF
SFTWEQQRTLDENRILDSLPHKMKTDVAINVHMKTLNKVQLFKDCDKALLRELVLKLRPI
LYLPGDYICRKGEVGKEMYIVKTGQVQVVGGEHDDEVLATLTEGSVFGEISLLSLCGTNR
RTADVRSHGFSNIFVLSKEDLNEAIKFYPNAQEILKRKARELIQQNAAREHRQIPNELLD
DQYGNSTENLMRVL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatcacatctgttatgtgaaacgatggatagaataccaccacaatatgattac
tataacacaactgatgaaccatggttgtctgataatatgccaattacaaatgaaagttct
tcgggatctgatgaattgtattccacatttaccacaccggtttctccaattgaacaatct
acaagtttgaatgcgattaaattaatggacaaattaaatgaacaatgctccaaagaacga
aacaagtgcgagaactatgttttgccatcttcgtcgagtatgagtttcaccgacgcggat
agcttgcacccgttgtcggctcattcaaggttccaattatccgacatgccaatagaacta
cagccggaaaagtcattagaaaaacgctcgtggttctttttggcttgggtcactagtctg
gacttcatcatcgaacctcagagcttatgttacgtggcatggttaagcctcgttaccatg
tgctacctgtacaattgttgggtgataccgttgcgtataacatttccttatcagacaccg
gaaaacctatggaagtggatgttgctagactattgcacggacgcgatcaatttgctggac
acgtttgtgattaaaccgcgtattatgtaccttaaggacgggttttgggtgcgtgatctg
aaactcattgaagtcaactatttggaaaaacttcaatcgaaattggacatcatttctctt
ttgccggctgacttgatatgtctaacaccaggatttacttcagaaatgttacctttgatg
agactaaacagaattattaagattcagacgttttgggaattcttcgatcatttcgacagt
gttttgtcgtcgccgtatgtagtccgagtaacaagaacattgacatacatggtctactta
gtgcatttgaacgcgtgtgcgtattactatgtttcggttaaggaagggcttgctacgaac
aattgggtgttcaacggtcagggaaacgcgtacatacgctgttttttcttcgccacaaag
acagcaacgtccattgggaaaaatccacacccggaaaacgaagctgaatacttgttcatg
actgctagctggctgatgggcgttttcgtatttgcaattttaattggacagattcgtgac
ataatagcaacggccaccagatctcaaaccgaatataggaaactgcaagacgagacgtta
gaatacttgaggaaattgaacatacctccacggatacgagaacgagttgaacagtggttt
tcgttcacttgggaacaacaaagaaccttagacgaaaatcgtattttggactctctgccg
cataaaatgaaaactgacgtagccatcaacgtgcatatgaagacgctgaacaaggtgcag
ttgttcaaagattgcgacaaagcactactgcgtgagctggtgttaaaattgcgtccgata
ttgtacttgccgggcgattatatatgccgcaagggcgaggtcggcaaagagatgtacatt
gtaaaaaccggacaagtccaagtagtcggcggtgaacacgacgacgaagtgttagccacg
ctcacagaaggttcggtgtttggcgaaatcagcttattgagcctgtgcggtactaatcgg
aggacggcggacgtcaggtctcacggattttccaatatttttgttctgagcaaagaagat
cttaacgaagctatcaagttttacccgaacgcccaagaaatactgaaacgcaaagcaagg
gagctgattcagcaaaatgcagcaagagaacataggcaaatacctaatgaattattggac
gaccaatacggaaacagcacggaaaacttaatgcgagttttataa
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