Rhopalosiphum maidis (corn leaf aphid): 113560492
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Entry
113560492 CDS
T06065
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03440
Homologous recombination
rmd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113560492
03460 Fanconi anemia pathway
113560492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmd03032
]
113560492
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113560492
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
113560492
DNA replication proteins [BR:
rmd03032
]
Eukaryotic type
DNA Topoisomerases
113560492
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
113560492
FA (Fanconi anemia) pathway
113560492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Toprim_4
zf-C2H2_10
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
113560492
NCBI-ProteinID:
XP_026822190
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Position
1:complement(70494554..70501020)
Genome browser
AA seq
917 aa
AA seq
DB search
MFLKRNQINFSFLLKNVYRIHFCGYSNKEINSRMRVLNVAEKNDAAKNIAGHLSGGNLQR
REGFSKFNKIYEFNHTFQGSPSTMIMTSVSGHLLGYEFQGSYRSWTSCSPLELFHIPVVK
ECPKDFLNIKKTLVREVRSCNALVIWTDSDREGENIGFEIIDVCKEVNPRIQVYRATLSE
ITKPSVQRAISSLGPPNKNISDAVDVRSELDLRIGAAFTRYQTMRLQKVFPEVLAKSLIS
YGSCQFPTLGFVVERYKDIQNFIPENFWKIKVHHKIENLDVEFSWQRVRLFDEVLCNVLY
ERCQENPTALVLKVTKKPKSKWRPVPLDTIELEKAASRKLGINAKETMKIAEKLYSQGFI
SYPRTETNIFPKELNLSNLVQLQVQDNNWGNFAQNVLNNGPLPRQGKKSDQAHPPIHPTK
YTNGLQDRERKVYEYVVRHFLACLSKDAEGEETIVNIEINGEKFLANGLRIIALNYLEVY
PYDKWSNKQIHNYNQGQSFTPTELEMVDGQTSPPNLLTEADLISLMDKHGIGTDATHAEH
IETIKSRLYVGLENNKYFVPGELGIGLVEGYDNMGFEMSKPHLRAELEADLKKICEGTKS
PLVVLREQIAKYKEVFIKTTEQVEKLDQSLGKYLRAQPIAFQNNGQHESMTVKNIRKCPV
CKQTNLVLKKKQNNQGFYITCTGFPTCRNTYWLPPSVIEAQVSDNVCSQCSENIKLIKFQ
FTARSMRPHYPDTYEGCINGCDSTLCEILQVNMSHPSSSSSNTQLSNRNIVTTNQNRGSN
RDNNVSRPTNNFSRTGSSQNVQPPNNDQVCCQCGNAAKLLTVTRETANKGRQFYGCSKQI
SATDRCTFFLWADNQPMPAAGRPNIQFNNRNNSQNNNGLMNNSYRARAVNNQANSGGQRK
CGLCKQPGHTRRNCPQN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgaaaaggaatcaaattaatttttcatttttgttgaaaaatgtgtatcgaata
catttttgcggatactcaaataaagaaataaacagtagaatgagagtattgaatgttgct
gaaaaaaatgatgcagcaaaaaatattgctgggcatttgtctggaggcaatcttcaaaga
agagaaggcttttcaaaatttaacaaaatatatgagtttaatcatacttttcaagggtct
ccaagcactatgatcatgacatcggtttctggtcatttacttggttatgaattccaaggt
tcataccgttcatggacatcttgttctcctcttgaattatttcatattcctgtggtaaaa
gaatgtccaaaagactttcttaatattaagaaaacattagttagagaagtccgatcatgt
aatgcattagtcatatggactgattctgatagagaaggagaaaatattggatttgaaata
attgatgtgtgtaaagaagttaatccaagaattcaagtttatagagctacattatcagaa
attactaaaccatcagtacaaagagccattagtagtcttggacccccaaataaaaatatt
agtgatgcagttgatgtgagaagtgaattagatttaagaattggtgcagcatttactcgt
tatcaaacaatgcgtttacaaaaagtattccctgaagtattagctaagagtttaataagt
tatggtagttgtcaatttccaacattaggatttgtggttgaacggtacaaagatattcaa
aattttattccagaaaatttttggaaaattaaagttcatcacaaaattgaaaatttggat
gtagaattttcatggcaacgagtaaggttatttgatgaagttctttgtaatgtactttat
gagcgttgccaagaaaatccaactgctttggtgttgaaagtaactaagaaacctaaatcc
aaatggcgaccagtacctttagatactattgaattagaaaaagctgccagtcgtaaactt
ggaataaacgctaaagaaactatgaaaattgctgaaaaactgtatagtcaaggttttatt
agctatcctagaactgaaacaaatatatttcctaaagaattaaacctatcaaacttagtt
caattgcaagtacaagataataattggggtaattttgcacaaaatgttctaaacaatggt
cctttaccgcgacaaggtaaaaaatctgatcaggcacatcctccaatacatccaactaaa
tacacaaatggacttcaagatagagaacgtaaggtttatgaatatgttgtgagacatttc
ttagcttgtttatctaaagatgctgagggtgaagaaactattgtaaatattgaaataaat
ggagaaaagtttttagcaaacggtcttcgaattatcgcattgaattacctagaagtgtat
ccttatgataaatggtctaataagcagatccataattataaccaagggcaatcatttacg
cctactgaattagaaatggttgatggacaaaccagtcctccaaatctcctcacagaagct
gatctaatttctttgatggataaacatggtattggtaccgatgctacgcatgcagaacat
attgaaactatcaagtcacgtttatacgttggactagaaaataataaatactttgttcct
ggagaacttggtattggtcttgttgaaggttatgataatatgggttttgagatgtcaaaa
ccccatttaagagctgaacttgaagcagatttaaaaaaaatatgtgaaggtaccaaatcg
cccttggtagtacttagagaacaaatagctaagtataaagaagtatttatcaaaacaaca
gaacaagtggaaaaattagatcaatctttaggaaaatatttaagagcacagcctattgct
ttccaaaataatggtcaacatgaatcaatgacagtaaaaaatattcgcaaatgccctgtt
tgtaaacaaactaatctagtattaaaaaaaaagcaaaacaatcaaggattttatataacg
tgtactggctttccaacttgtagaaatacatactggttacctcctagtgtaattgaagca
caagtcagtgataatgtttgttctcagtgttcagaaaatataaaattaattaaatttcaa
ttcactgctagaagtatgcgaccacattatccagatacctatgagggttgtataaatggg
tgtgattctacattgtgtgagatacttcaagttaacatgtctcatccttcatcttcgtct
tcgaatactcaactttctaacagaaatattgttacaactaatcaaaataggggttctaat
cgtgacaataatgtttctcgtccaacaaataatttctctaggactggtagttctcagaat
gttcagcctcctaataatgatcaagtttgctgtcagtgtggaaatgctgctaaactatta
acagttaccagagaaacagcaaataagggtcgtcaattttatggatgctcaaaacaaatt
tctgcgactgatagatgtactttctttttatgggctgacaatcaacctatgcctgctgcc
ggtcgccccaatatacaatttaacaatagaaataatagtcaaaataataatggactaatg
aataattcatacagagctagagctgtaaacaatcaggcaaattctggtggacaaagaaaa
tgtggactttgtaagcagccaggtcatacacgaagaaactgtccacaaaattaa
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