Cupriavidus metallidurans: Rmet_5140
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Entry
Rmet_5140 CDS
T00351
Name
(GenBank) putative AMP-dependent synthetase and ligase / putative o-succinylbenzoate-CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00061
Fatty acid biosynthesis
rme00071
Fatty acid degradation
rme01100
Metabolic pathways
rme01212
Fatty acid metabolism
rme02024
Quorum sensing
Module
rme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmet_5140
00071 Fatty acid degradation
Rmet_5140
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_5140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rme01004
]
Rmet_5140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_5140
Enzymes [BR:
rme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmet_5140
Lipid biosynthesis proteins [BR:
rme01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Rmet_5140
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmet_5140
Exosomal proteins of breast cancer cells
Rmet_5140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DevR
Motif
Other DBs
NCBI-ProteinID:
ABF11999
UniProt:
Q1LCX7
LinkDB
All DBs
Position
megaplasmid:complement(1837440..1839017)
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AA seq
525 aa
AA seq
DB search
METEYLATLPSAIRHFARERAGAIAYAFEGRETTFADFDRHTDRVAQALLADGVKAGDRI
AYVGKNSDHYFELFFGAAKMGAVIAPVSWRLAGPEIQYIVSHCDATLVFVGPESSASVRN
LLPALPLVRRAVAMEGGEPDWPAYTEWRDACPDTPPAHEAKPADVVLQLYTSGTTGRPKG
VMLMHRNLTSGTEISMREGADWSQWNDEDVSLVAMPVAHIGGSGWGVRGVLVGCKGVVAR
EFDPGKVLDYIEHDRISKLFMVPAAMQIVLRDPRARQVDYSRLKHMLYGSSPIPAALLRE
GMAVFGCGFVQQYGMTETTGTIVALPPEDHTPADVPRMRAAGKAMPGSEVAVVGPDGQRL
AAGEVGEVVIRSPQNMAGYWKQEEETARTIDADGWLRSGDAGYMDADGYLYIHDRVKDMI
ISGGENIYPAEVESAIYGHPAVADVAVIGVPDERWGEAVKAMVVLRPGVAADADSILGWA
RERIAGFKVPKSIDFIDAMPRNPSGKLLRRALREPYWTGRTRQVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaatacctcgcgacgctgcccagcgcgattcgccacttcgcccgggagcgg
gccggggccattgcgtacgccttcgaaggccgcgagaccacgtttgccgatttcgatcgc
catacggatcgcgtggcgcaggccctgctggccgacggcgtgaaggctggcgaccgcatc
gcctatgtcggcaagaacagcgaccactatttcgaactattctttggcgcggccaagatg
ggggccgtcattgcaccggtgagctggcggctggcggggcccgaaatccagtacatcgtc
tcgcactgcgacgcgacgctggtcttcgtcggccccgagtcatcggcatcggttcgcaac
ctgctgccagcgctgccactggtgcgccgcgccgtggcgatggagggcggggagccagac
tggccggcctacacggaatggcgcgacgcgtgcccggatacaccaccggcgcacgaagcg
aagcccgccgacgtggtgctgcagctctacacgtctggcactaccggacgtcccaagggc
gtgatgctgatgcatcgcaacctgaccagtggtaccgagatctcgatgcgcgaaggtgcc
gactggtcgcaatggaacgacgaagatgtgtcgctggtggccatgccggtggcgcatatc
ggcggttcgggctggggcgtgcgcggtgttcttgtcggctgcaagggtgtcgtggcgcgc
gaattcgatccgggcaaggtgctcgactatatcgagcacgaccgcatcagcaagctgttc
atggtgccggctgcgatgcagatcgtgctgcgtgatccgcgcgcgcgccaggtggactat
tcacgcctcaagcacatgctgtacggttcgtcgccgattcccgcagcgctgctgcgtgag
ggcatggcggtgtttggctgcggcttcgtgcagcagtacggcatgacggagaccacgggc
acgatcgtggcgctgccgccggaagatcatacgcccgccgatgtcccgcgcatgcgcgcc
gccggcaaggccatgcccggtagcgaggtggcggtggtcgggccggatggccagaggctg
gctgccggcgaggtgggcgaagtggtgatccgctcgccgcagaacatggcgggctactgg
aagcaggaggaagagaccgcccgcaccatcgacgccgacggctggctgcgcagtggcgat
gctggctacatggacgcggacggctacctctatatccacgaccgggtcaaggacatgatc
atcagcggcggggagaacatctacccggccgaggtggagagcgccatctacggccacccg
gccgttgccgacgtggccgtgatcggtgtgccggacgagcggtggggtgaggcggtcaag
gcgatggtggtgctgcgcccgggtgtggccgctgacgccgacagcattctgggctgggcg
cgcgagcgtatcgcgggtttcaaggtgcccaagagcatcgacttcatcgatgccatgccg
cgcaatccgtcgggcaagttgctgcgtcgggcgctacgggaaccgtactggacgggccgc
acccggcaggtgaactag
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