Rossellomorea marisflavi: D5E69_10505
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Entry
D5E69_10505 CDS
T07410
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5E69_10505 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmf03019
]
D5E69_10505 (rny)
Messenger RNA biogenesis [BR:
rmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D5E69_10505 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
FUT8_N_cat
DUF2844
OmpH
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QHA38439
LinkDB
All DBs
Position
2010692..2012251
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AA seq
519 aa
AA seq
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MQPITLISILLSLIVGVVVGYFIRRSIAEAKIAGAKGSAEQILEEARREADALKKEALLE
AKDENHKLRTEMENELRERRNELQKQENRLMQKEENLDRKDETLDKRESQLERREGTLNE
RQQHIEEMESKVDEMVRLQQTELERISSLTREEAKGIILERVENELSHDIAIMVREHETR
AKEDADKKAKEVLSLAIQRCAAEHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALEKLVQDGRIHPARIEEMVDKSRREVDEYIRE
IGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSIEVAHLSGLLAAELGEDERLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVVNSIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVRPEAIDD
LESHRLARDIRKRIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctataacactcatctccattttgcttagccttatcgtcggtgtcgttgttgga
tactttattcgcagatccattgccgaagcgaagattgcaggggccaaaggttccgcagag
cagattttggaagaggccaggcgcgaggcggatgctctgaaaaaagaggccttgcttgag
gcaaaggacgaaaatcataaacttcgcactgaaatggaaaatgaactccgtgaacgaaga
aatgaactgcaaaaacaagaaaatcgtttgatgcaaaaagaggagaatctggaccgtaaa
gatgagacactcgataaacgggaatctcagcttgaacgcagagaaggtactctaaacgag
agacaacaacatattgaagagatggaaagcaaagtggacgagatggtaagattgcagcaa
acggagcttgaacgcatctcgagcctgacgcgagaagaagcgaagggcatcattcttgag
cgtgtggaaaacgaattgtcccatgatattgccatcatggttcgcgaacacgaaacccgt
gcaaaggaagacgcagacaagaaagcgaaggaggtcctatccctcgcaattcagcgttgt
gctgcagaacatgtggccgaaacgactgtcagcgtcgtgaacctgcctaacgatgagatg
aaaggtcgtatcatcggaagggaaggaagaaacatccgtactctggaaacactaacagga
attgatctcattatcgatgataccccagaggcggtcattctttcaggattcgatccgatc
cgcagggagactgctcgaatcgcactggagaaattggtccaggatggtcgtattcatccg
gcacgcatcgaagaaatggtcgacaaatcccgtcgtgaagtggatgaatatatccgcgag
attggtgaacagaccacattcgaagtaggtgtccacggattgcatcctgatctcatcaag
atcctcggtcgcttgaagtaccgtacgagctatggacagaacgtcttgaagcattccatc
gaagtagctcatctatccgggctattggcggcagaacttggtgaagatgaacgtttggct
aaacgggctggtctccttcatgatatcgggaaggccattgaccacgaagtggaaggcagt
cacgttgaaatcggcgtcgagcttgccactaagtataaggaacatccggtcgtcgtgaac
agtatcgcatcccatcacggggataccgagccgacgtccatcatcgcagtactcgtcgct
gcagcagatgcactttctgcagcaagaccgggtgcaagaagcgaaacccttgagaactat
atccgacgcttggagaaactggaagagatttcagagtcctatgaaggagtcgagaaatca
ttcgccatccaggcagggcgcgaagtccggatcatggtccggccggaagccatcgatgat
ctggaatctcacagactggcacgggacatccggaaacggatcgaaagtgaactggattat
ccgggacatattaaagtcacggtaattcgtgagacaagggcagtagaatacgcaaaataa
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