Rhipicephalus microplus (southern cattle tick): 119162918
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Entry
119162918 CDS
T07403
Name
(RefSeq) circadian locomoter output cycles protein kaput-like
KO
K09026
neuronal PAS domain-containing protein 2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119162918
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119162918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
119162918
NCBI-ProteinID:
XP_037270730
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All DBs
Position
1:202538870..202566508
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AA seq
761 aa
AA seq
DB search
MSAPWWSCRAADESDLDEKDETKRKSRNLSEKKRRDQFNMLINELCSMVSTSSRKMDKST
VLRATIAFLRAHNDVSIQNQEQESQENWKPSFLSNEEFTHLMLESLEGFLLVLSLSGQIL
YTSESVASLLGYLPHELHNIFILDILHESDHGTMCEVLSSASSQGAGIIRQDGTHGFPLG
GLEYDSNSCSSACSPNTGSAELAAPCLVAMVRLQTPQLMHELILCDGSRNEFSSRHSLEW
KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVEDLEKVAAGQEALMQTGEGTSCHYRFLTK
GQQWIWLQTRYYITYHQWSSKPEFVVCTHTVMSYDEDLTHSKAAPSSGVPAASYSRTSAP
TRMSYQSSRVSSAPSVSSRDSLSPNLSEKSGCAGGVLREEHGSSARSCGNQLSLPFTEAC
TITRESPTMGRLAVARLGADLFGIVAAAARAHGPEAAVPDHHGVPRTAHHAHHFAANRGH
FHWFRSGRHGGGCSGAGDAELGCSQRRSVVRETARATSAVAIAPHLSMRGASDPHLSNGR
DRCCNRGTSSACLENNQQISPRSMQSQPPGQVSPLPPQQQQQQQQQQQHAGGQQPQQDQF
QDYLRRRHQTLQQQIIRQQEELRRVSEQLMLVHFINPNLAATVTSGNAPLYTLSLPTTTL
SVPTSTMAGPATALTPTPYLLATGPAGCMGNALQPRDPMQQTKTQQLQQQQSLQQRQQHQ
QEQQHRQQQQEQQHRQQQQDSQSLGFLETVPPASVAPCMHM
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccgtggtggtcttgtagggcagcggatgagagcgacctggatgagaaagac
gaaacgaagaggaagtcgcgaaacttgagcgaaaagaaaaggcgcgaccagttcaacatg
ctcatcaacgagctctgctccatggtgtccacgagttcgaggaaaatggacaaatccact
gtgcttcgtgccaccatcgcttttctcagagcccacaacgatgtatctatacaaaaccag
gagcaagaaagtcaggaaaactggaagccttcgtttctgtcaaacgaagagttcacgcac
ctaatgctcgagtcactcgagggcttcttactcgtactctcactgagcggtcaaatcctg
tacacttcggagagcgtggcgtccctactcggctaccttccccacgagctgcataacata
ttcattttggacatcttacacgaaagcgatcatggtaccatgtgcgaagtactcagttct
gcatcttcgcaaggagccggcataattcgccaagacggcacgcatggctttcccctgggc
ggcttggagtacgactcgaatagctgtagcagcgcgtgctcccccaacacgggctcggcc
gagctggcggcgccctgcctggtggccatggtgcggctgcagacgccgcagctcatgcac
gagctcatcctctgcgacggctcgaggaacgagttcagctcgaggcacagcctcgagtgg
aagttcctcttcctggaccacagggcacctcccataatcgggtacctgccgttcgaggtt
ctcggaacatctggctacgactactaccacgtcgaggacctcgaaaaagtggcggcgggt
caagaggccctgatgcagacgggtgagggcacgtcctgccactaccgctttctgaccaag
ggccagcagtggatctggctgcagacgcgctactacatcacctaccaccagtggagctcc
aagcctgaattcgttgtgtgcacccacaccgttatgagctacgacgaggacctgactcac
agcaaggctgcgccaagcagcggagtgccggcggcgtcgtactctcggacctcggcgcca
acccgcatgtcttaccagagctcgcgggtgtcctccgctccctcggtgagctccagggac
agcctgtcgcccaacctgtccgaaaagtccggatgcgccggcggagtgctgcgggaggag
cacggcagcagtgccagaagctgcggcaaccagctgtcgctgccgttcaccgaggcgtgc
accataacgcgcgagtcgccgacgatggggcgactcgctgtcgctcgcctcggagccgac
ctcttcggcatcgtcgcagctgcagcacgagcccatggaccagaggccgccgtaccagac
caccacggcgtgccacgcaccgctcatcacgctcaccactttgcagccaatcgcggccac
tttcactggttccgctcagggcggcatggcggcgggtgcagcggtgcaggcgatgctgaa
ctcggctgttcacaacgacgaagcgtcgtgcgcgaaacagcacgggcgacatctgctgtc
gcaattgcgccgcatctgagcatgcgcggcgccagtgatcctcaccttagcaacggccgc
gacaggtgctgcaaccggggaacctcttcggcgtgcctggaaaacaatcagcagatcagc
ccaaggtccatgcaatcgcaaccaccggggcaggtgtcaccgttgcctccacagcagcag
cagcagcagcagcagcagcagcaacatgccggtgggcaacagccgcagcaggaccagttc
caggattatctccggcgcaggcaccaaacattgcagcaacagatcatcaggcagcaggag
gaactgcggagggtctccgagcagctgatgcttgtgcacttcatcaatcccaacctggca
gccactgtgacgagtggcaatgctcccctttacacgctgtccctgccaacgacgacgctg
tcggtgccgacgtcaacgatggccggtccagcgaccgcgctgacgccgacgccctatttg
ctggccacggggcccgctggttgtatgggcaacgccctgcagccgagggaccctatgcag
caaacgaagacccagcagctgcagcagcagcagtcgctacaacaacggcaacaacatcag
caagagcaacaacaccgacagcaacagcaggagcaacaacaccgacagcaacagcaagac
agccaaagcttgggcttcttggaaactgttcctccggcatctgttgctccgtgtatgcac
atgtga
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