KEGG   Rhipicephalus microplus (southern cattle tick): 119181070
Entry
119181070         CDS       T07403                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018  RNA degradation
rmp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119181070
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119181070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmp03019]
    119181070
   03041 Spliceosome [BR:rmp03041]
    119181070
Messenger RNA biogenesis [BR:rmp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119181070
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     119181070
Spliceosome [BR:rmp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    119181070
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 119181070
NCBI-ProteinID: XP_037288141
LinkDB
Position
11:117726515..117728915
AA seq 142 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETLIKGRGRGDAGKRGGPGGRGGRGGRGGPFGGRGGRGD
GDGRRGGGQGGRGGRGGRGRPN
NT seq 429 nt   +upstreamnt  +downstreamnt
atgttgccgctatccctgttgcggacggcccagaatcatccgatgcttgtagaactcaag
aacggcgagacatacaacggccaccttgtcagctgcgacaactggatgaacatcaacctc
agagaggttatctgcacgtctagggacggtgacaagttctggcgcatgcccgagtgctac
atccggggcagcaccatcaagtaccttcgcattcccgatgaagttattgacatggtcaag
gaagaaacgttgatcaagggtcggggacgtggggatgccggcaagcgtggcggacccgga
ggtcgcggtggccgaggcggcagaggtggtccctttggaggccgaggtggcaggggtgac
ggagacggacgaagaggcggtggccaaggtggcaggggcggaaggggaggacgtggtcgt
ccgaattag

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