Rattus norvegicus (rat): 100362121
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Entry
100362121 CDS
T01003
Symbol
Ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03420
Nucleotide excision repair
rno04115
p53 signaling pathway
rno04120
Ubiquitin mediated proteolysis
rno05161
Hepatitis B
rno05169
Epstein-Barr virus infection
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05210
Colorectal cancer
rno05212
Pancreatic cancer
rno05213
Endometrial cancer
rno05214
Glioma
rno05216
Thyroid cancer
rno05217
Basal cell carcinoma
rno05218
Melanoma
rno05220
Chronic myeloid leukemia
rno05222
Small cell lung cancer
rno05223
Non-small cell lung cancer
rno05224
Breast cancer
rno05225
Hepatocellular carcinoma
rno05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100362121 (Ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
100362121 (Ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100362121 (Ddb2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100362121 (Ddb2)
05202 Transcriptional misregulation in cancer
100362121 (Ddb2)
09162 Cancer: specific types
05210 Colorectal cancer
100362121 (Ddb2)
05212 Pancreatic cancer
100362121 (Ddb2)
05225 Hepatocellular carcinoma
100362121 (Ddb2)
05226 Gastric cancer
100362121 (Ddb2)
05214 Glioma
100362121 (Ddb2)
05216 Thyroid cancer
100362121 (Ddb2)
05220 Chronic myeloid leukemia
100362121 (Ddb2)
05217 Basal cell carcinoma
100362121 (Ddb2)
05218 Melanoma
100362121 (Ddb2)
05213 Endometrial cancer
100362121 (Ddb2)
05224 Breast cancer
100362121 (Ddb2)
05222 Small cell lung cancer
100362121 (Ddb2)
05223 Non-small cell lung cancer
100362121 (Ddb2)
09172 Infectious disease: viral
05161 Hepatitis B
100362121 (Ddb2)
05169 Epstein-Barr virus infection
100362121 (Ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
100362121 (Ddb2)
03400 DNA repair and recombination proteins [BR:
rno03400
]
100362121 (Ddb2)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100362121 (Ddb2)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100362121 (Ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100362121
NCBI-ProteinID:
NP_001258275
RGD:
1310164
Ensembl:
ENSRNOG00000014071
UniProt:
D3ZR08
LinkDB
All DBs
Position
3:complement(77185114..77207650)
Genome browser
AA seq
432 aa
AA seq
DB search
MAPKKCPETQKSPDVAVLLKSKSRRSPQELEPEAKKLFVQGPVSSRKCESCCLLAELSSL
QIPPRSSSIVRDLYQQKLGKATWPSLQQGLQKSFLHSLASYRVFQKAAPFDRRTTSLAWH
PTHPSTLAVGSKGGDIMIWNFGIKDKPIFLKGIGAGGSITGLKFNHLNTNQFFASSMEGT
TRLQDFKGNILRIYTSSNSCKVWFCSLDVSAKSRVVVTGDNMGHVILTNTDGKELWNLRM
HKKKVAHVALNPCCDWLLATASIDQTVKIWDLRQIKGKDSFLFSLPHRHPVNSACFSPDG
ARLLTTDQNNEIRVYSASQWDSPLSLISHPHRHFQHLTPIKATWHSRHNLIVVGRYPDPN
LKSCVPYELRTIDVFDGSSGKMMCQLYDPGYSGITSLNEFNPMGDTLASTMGYHILIWSP
EEDGSLKDHERL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaaatgcccagaaacccagaagtcccccgacgttgcggtgctcctcaag
agcaaaagccgcagaagtcctcaggagctggagcccgaagccaagaagctgtttgtgcag
ggtcccgtttctagtaggaaatgtgagtcgtgctgccttctggcagagttgtccagcttg
cagatccctccgaggagcagcagcattgtccgggatctttaccagcagaagttgggcaaa
gccacctggccgtcactacagcagggtctccagaagtcctttttgcactctctagcttct
taccgggtattccaaaaagctgccccctttgacaggaggacaacgtccttggcatggcac
ccgactcatcccagtactttggctgtgggctccaaagggggagatattatgatctggaac
tttggcataaaggacaaacccatcttccttaaagggattggagctggaggaagcatcact
gggctgaagtttaatcatctcaataccaaccagttttttgcctcctcaatggagggaaca
accaggctgcaggattttaaaggcaacattctcagaatttataccagctcaaactcttgc
aaggtctggttttgcagccttgatgtttctgccaagagccgagtggtggttacaggagac
aatatgggacacgtgatcctgacgaacacagatggcaaggagctttggaacctcagaatg
cacaaaaagaaagtagcccatgtggccctgaacccctgctgtgattggcttctggccaca
gcctccatagatcaaacagtgaaaatttgggacctgcgccaaattaaagggaaagacagc
ttcctcttctcactgcctcacaggcatcctgtcaattcagcttgttttagccccgatgga
gctcggctcctgactactgaccagaacaatgagattcgggtttactctgcctcccagtgg
gatagccccctgagtctgatctcccaccctcaccgccattttcagcacctcacacccatc
aaggcgacctggcattcacggcacaacctcattgttgtgggccgatacccagatcctaat
cttaaaagttgtgttccctatgaactaaggacaatagatgtgtttgatggaagctcgggg
aagatgatgtgtcagctctatgatccaggatattccggtattacttcgctcaatgagttc
aatcctatgggagacacactggcttctactatgggttatcatattctcatttggagccca
gaggaagatgggtcattgaaagaccatgaaagactatga
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