Rattus norvegicus (rat): 289196
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Entry
289196 CDS
T01003
Symbol
Tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
289196 (Tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
289196 (Tmco1)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
289196 (Tmco1)
Transporters [BR:
rno02000
]
Other transporters
Pores ion channels [TC:
1
]
289196 (Tmco1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF4199
DUF5683
Vpu
Exonuc_VII_L
DUF6809
DSHCT
ArsP_1
DLH
Nucleoside_tran
SLC52_ribofla_tr
Peptidase_S49_N
Folate_carrier
Piezo_TM1-24
DUF2570
DUF6080
DivIC
Motif
Other DBs
NCBI-GeneID:
289196
NCBI-ProteinID:
NP_001009631
RGD:
1359178
UniProt:
Q5I0H4
A6IDL2
LinkDB
All DBs
Position
13:81993172..82016496
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AA seq
188 aa
AA seq
DB search
MSTMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT
PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP
PPPSGKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgtttgcagacacgctgctcatcgtttttatctccgtgtgcaccgcgctg
ctcgccgagggcataacctgggtcctggtttacaggacagacaaatacaagagattgaag
gcggaagtggaaaaacaaagtaaaaagttagagaagaagaaggaaactataacagagtca
gctggtcgacaacaaaaaaagaagatagagcgacaagaagagaaactaaagaacaacaat
agagacctgtcaatggtgcggatgaaatccatgtttgcgattggcttttgttttactgcc
ttaatgggaatgtttaattccatatttgatggtagagtggtggcaaagctccccttcact
cctctctcttacatccaaggactgtctcaccgaaacctgctgggcgatgacaccacagac
tgctccttcatcttcctgtatattctctgtactatgtccattcgacaaaacatccagaag
attcttggccttgccccttcacgagctgccaccaagcaggctggtggatttcttggcccc
ccacctccttctggaaagttttcctga
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