Rattus norvegicus (rat): 300802
Help
Entry
300802 CDS
T01003
Symbol
Aph1b
Name
(RefSeq) gamma-secretase subunit APH-1B
KO
K06172
gamma-secretase subunit APH-1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04330
Notch signaling pathway
rno05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
300802 (Aph1b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
300802 (Aph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aph-1
Motif
Other DBs
NCBI-GeneID:
300802
NCBI-ProteinID:
NP_001040555
RGD:
1562468
UniProt:
Q0PY50
LinkDB
All DBs
Position
8:complement(67429198..67454735)
Genome browser
AA seq
257 aa
AA seq
DB search
MTAPVFFGCAFIAFGPALALYLFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT
DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKASEGLKSINPEETAPSMRLLAYVS
GLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQFFLNSAFMTLVIIMLHVFWGIVFFDG
CEKNKWYILLTVLLTHLLVSTQTLLSPHYEVNLVTAYIIMVLMGIWAFCVAGGSRRSLKL
CLLCQDKDFLLYNQRSR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcccgtgttcttcggttgcgccttcatcgccttcgggcccgcgctcgctctc
tacctcttcaccatcgccaccgaccctttgcgagtcatcttcctcatcgccggtgccttc
ttctggttggtgtctctgctgctttcgtctgttttctggttcctagtgagagtcatcact
gacaacagagatggaccagtacagaattacctgctcatctttggagtgttgctctctgtc
tgtatccaagagctgttcaggctcgcatattataggctgttaaaaaaagccagcgagggt
ttgaaaagcataaaccctgaggagacagcaccttcgatgcgactgttggcctatgtttct
ggcttgggctttggaatcatgagtggagtgttttcctttgtgaacaccctgtctaatgcc
ttggggccaggcacagtgggcattcatggtgattctcctcagttcttccttaattcagct
ttcatgacgctggttatcataatgctgcacgtgttctggggcatcgtgttttttgacggc
tgtgagaagaataagtggtacatcctcctcacagttctcctgacccacctgctggtgtcc
acccagactttactaagtcctcactatgaagtgaatctggtgacagcatatataatcatg
gtgctcatgggcatctgggcattctgtgttgctggaggcagccgccgaagcctgaaactc
tgtctgctctgccaagacaaggactttcttctttacaaccagcgctccagataa
Rattus norvegicus (rat): 365872
Help
Entry
365872 CDS
T01003
Symbol
Aph1a
Name
(RefSeq) gamma-secretase subunit APH-1A
KO
K06172
gamma-secretase subunit APH-1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04330
Notch signaling pathway
rno05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
365872 (Aph1a)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
365872 (Aph1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aph-1
Peptidase_M3_N
Motif
Other DBs
NCBI-GeneID:
365872
NCBI-ProteinID:
NP_001014277
RGD:
1311546
Ensembl:
ENSRNOG00000023816
UniProt:
Q5PQQ3
LinkDB
All DBs
Position
2:183437676..183443113
Genome browser
AA seq
247 aa
AA seq
DB search
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT
DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYV
SGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFD
ACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFVTAGGSLRSIQ
RSLSCKD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgctgtgtttttcggatgcaccttcgtcgcgttcggcccagccttcgccctt
ttcctgattactgtagccggagaccctcttcgggttatcatcctggtggcgggagccttt
ttctggctggtttccctgctcttggcctctgtggtctggttcatcttggtccatgtgaca
gaccgatcagatgcacggctccagtatggcctcctgatttttggtgctgctgtctctgtc
cttctacaggaagtgttccgttttgcctactacaagctccttaagaaggcagatgagggc
ttagcatcactaagtgaggacggaagatcgcccatctccatccgacagatggcctatgtt
tctggtctgtccttcggtatcatcagtggtgtcttctctgttatcaatattttggctgat
gcacttgggccaggtgtggttgggatccatggagactcaccctattacttcctgacttca
gcttttctgacagcagccattatcctgctccataccttttggggagttgtgttctttgat
gcctgtgagaggagacggtactgggctttgggcctggtagttgggagtcaccttctgact
tcaggactgacattcctgaacccctggtatgaggccagcctgctgcccatctatgcagtc
accgtttccatggggctctgggcattcgtcacagccggaggctccctccggagtatccag
cgcagcctttcgtgtaaggactga
Rattus norvegicus (rat): 691658
Help
Entry
691658 CDS
T01003
Name
(RefSeq) gamma-secretase subunit APH-1B isoform X4
KO
K06172
gamma-secretase subunit APH-1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04330
Notch signaling pathway
rno05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
691658
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
691658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aph-1
AmoC
Motif
Other DBs
NCBI-GeneID:
691658
NCBI-ProteinID:
XP_001079175
RGD:
1597236
LinkDB
All DBs
Position
8:complement(67341790..67363967)
Genome browser
AA seq
216 aa
AA seq
DB search
MTAAVFFGCAFIAFGPALSLYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT
DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKANEGLKSINPEETAPSMRLLAYAF
MTLVIIMLHVFWGIVFFDGCEKNKWYILLTVLLTHLLVSTQTLLSPHYEVNLVTAYIIMV
LMGIWAFCVAGGSRRSLKLCLLCQDKDFLLYNQRSR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcggtgttctttggttgcgccttcatcgccttcgggcccgcgctctccctt
tacgtcttcaccatcgccactgatcctttgcgagtcatcttcctcatcgccggtgccttc
ttctggttggtgtctctgctgctttcgtctgttttctggttcctagtgagagtcatcact
gacaacagagatggaccagtacagaattacctgctcatctttggagtgttgctctctgtc
tgtatccaagagctgttcaggcttgcatattataggctgttaaaaaaagccaatgagggt
ttgaaaagcataaaccctgaggagacagcaccctcgatgcgactgttggcctatgctttc
atgacgctggttatcataatgctgcacgtgttctggggcatcgtgttttttgacggctgt
gagaagaataagtggtacatcctcctcacagttctcctgacccacctgctggtgtccacc
cagactttactaagtcctcactatgaagtgaatctggtgacagcatatataatcatggtg
ctcatgggcatctgggcattctgtgttgctggaggcagccgccgaagcctgaaactctgt
ctgctctgccaagacaaggactttcttctttacaaccagcgctccagataa
DBGET
integrated database retrieval system