Rattus norvegicus (rat): 303538
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Entry
303538 CDS
T01003
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
3.6.4.13
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
303538 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
303538 (Dhx58)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
303538 (Dhx58)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
303538 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_22
CATASP
zinc_ribbon_4
DUF1871
Motif
Other DBs
NCBI-GeneID:
303538
NCBI-ProteinID:
NP_001092258
RGD:
1310093
Ensembl:
ENSRNOG00000018247
UniProt:
D3ZD46
LinkDB
All DBs
Position
10:complement(85620352..85631776)
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AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGKVVVLVNRVHLV
NQHAEEFRRMLDKQWTVTTLSGDMGSRAGFGLLARSHDLLICTAELLHLALKSSEEDEHV
ELTEFSLIVVDECHHTHKDTIYNTILSRYLEHKLKKAKPLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTWRIMSPKNCYSQLLEHNPKPCKQYDLCQRRTQDPFGDLLKKLMKQI
HQQLEMPDLKQQFGTQMYEQQVVQLSKDAAEAGLQEQRVYALHLRRYNDALYIHDTVRAW
DALNMLQDFYDTERALKTQMVHAERWLLELFDDHRKALAQFAAQGPENPKLEMLEGILLK
QFGSPDHTRGIIFTRTRQTASSLLLWLRQQPCLQTVNIKPQMLIGAGNTGQSTHMTQKDQ
QEVIQEFRDGKLNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FVATEGSREIKRELTNEALEVLMEQAVAAVQKMDPEEFKAKIQDLQLASLVKRAARAAHR
ESQQGQFPPDRVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPDFSVYYTTSQNPVVINKV
FKDWKPGGIIRCSNCGEVWGFQMIYKSVTLPVLKIRSMLLETPHGKIQAKKWSRVPFSVP
DFDILRDCTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaagtgatcttacctgctctggagggcaagaacatc
attatatggcttcccacgggtgctgggaagacccgggcagctgcctttgtggccaagagg
catctagagacagtagaccgaggcaaggtggtggtactggttaatagggtacacctggtg
aaccagcatgccgaggagttcaggcgcatgttggataaacaatggaccgtgacaaccctg
agtggggacatgggatcacgagctggttttggcctattggctcggagccatgacctgctc
atctgtacggcagagttactgcatctggcgctgaagagctctgaggaggatgaacacgta
gagctcacagaattctcgctgattgtggtggacgagtgtcaccatacccacaaggacacc
atctacaacaccatcttgagccggtacctagagcataaactgaagaaggcaaagcccctt
ccccaggtcctgggtctcacagcctccccaggcactggaggagccaccaagctccaaggg
gccattgaccacatcctacagctctgtgcgaatttggatacgtggcgcatcatgtcaccg
aagaattgctactcccagctgctggagcataacccaaagccctgcaagcagtatgacctc
tgccaaaggcgcacgcaggatccttttggagacttgctaaaaaagcttatgaagcaaatc
caccaacaactagagatgcctgacctgaagcagcagttcggaacccagatgtatgagcag
caagtggtacagttaagcaaggacgcggcagaggctgggctccaggaacagcgggtgtat
gcgctgcatttgcggcgctacaatgatgctctatatatccacgatacggtccgtgcgtgg
gacgcacttaacatgttgcaagatttctacgacacagaacgcgccctaaaaacacagatg
gtgcatgctgagcgctggctgctggagctgtttgatgaccatagaaaagctctggcccag
tttgcagcccaaggtcctgagaacccgaagttggagatgctggaagggatcctactgaag
cagtttgggagtcctgaccacactcggggtatcatcttcaccagaacccgtcagactgct
tcttccctcctgctctggcttcggcagcaaccttgcctacagactgtgaacatcaagccc
cagatgctgattggagcagggaacacaggccagagcacacatatgacccagaaagaccag
caagaggtgatccaggagttcagggatggtaaactgaaccttctagtggccacaagtgta
gcagaggagggcctggatatcgctcagtgcaatgtggtggtgcgctatgggctcctgacc
aatgagatctccatggtccaggctcggggtcgcgctcgagctggtcagagtgtgtactcc
ttcgtggctacagagggcagtcgggagataaagcgggagctgaccaatgaggcactggaa
gtgttgatggagcaggcagtggccgctgtccagaaaatggaccctgaggagttcaaggcc
aagatccaggaccttcagctagcatctctagttaagcgagcagcacgtgcggcccatcgg
gagagccagcaggggcagttcccaccagatcgcgtgcagcttctctgcatcaactgtatg
gtggccgttggctacgggagtgacctgcggaaggtggagggcacccaccacgtcaatgtg
aaccccgacttctcggtctactataccacttcccagaatcctgtggtcattaacaaggtc
tttaaggactggaaacctggaggaatcatcagatgcagtaactgtggagaggtctggggc
ttccagatgatctacaaatcagtgaccttgccggtgctcaaaatcagaagcatgcttctg
gagacccctcacgggaagatccaggccaaaaagtggtcccgagtgcctttctcagtacct
gacttcgacattctgcgggattgcacccaaagcctgtctgatctctcactggactga
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