Rattus norvegicus (rat): 316575
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Entry
316575 CDS
T01003
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
316575 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
316575 (Trip12)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
316575 (Trip12)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
HECT type E3
316575 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
316575
NCBI-ProteinID:
NP_001026829
RGD:
1306607
Ensembl:
ENSRNOG00000016963
UniProt:
F1LP64
LinkDB
All DBs
Position
9:complement(93364791..93491015)
Genome browser
AA seq
2025 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSCSSSSAVIVPQPEDPDRANTSERQKT
GQVPKKDNSRGVKRSASPDYNRTNSPSSAKKPRAFQHIESLSETNKPPSKSKKRHLDQEQ
QLKSAQLPSTSKAHTRKSVAAGSSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLAS
KSATSAKAGCSTITDSSSAASTSSSSSAVASASSTVPAGARVKQGKDQNKARRSRSASSP
SPRRSSREKEQSKTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLA
SLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPE
GNQETVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPH
LFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLG
GFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQ
CIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITP
DEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQ
LLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQI
DLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHP
YNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTN
TSGYSDLKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIY
FADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVM
HQVKHLAESESLLTSPPKACTNGSGSLGSTTPASSGTATAATNASADLGSPSLQHSRDDS
LDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNP
KTWGRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSS
ENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQL
LLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLS
QMEQFPVKVHDFPSGNGSGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPV
KIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFY
IGEHLLPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEES
SKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDP
SLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNI
PTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLD
RKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADL
GLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKA
IMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKS
QTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIF
WALNEGVCRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDH
GYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTE
NPDDFLPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaagaagctgcagttcatcatctgct
gtcatagttccgcaaccagaggatccagacagagccaatacttcagaaaggcagaaaacg
gggcaggtgcctaaaaaagacaattctcgaggagtgaaacgcagtgctagtccagactac
aacaggaccaattctcctagctctgcgaaaaagcccagagcatttcagcatattgagtct
ctctcagaaaccaataagccacctagtaagtcaaagaagagacatttagaccaggagcaa
caactgaaatctgcacaattgccgtcaacaagcaaggctcacaccagaaagagtgtggct
gctggtagttcacggagtcagaaaagaaaaaggacagagagttcttgtgttaagagtggt
tctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctggcttca
aaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttctgctgcc
tctacttcctcctcatcttcagctgtagcctcggcctcttctactgtaccagcaggtgcc
agggtgaaacaaggaaaagaccagaacaaggccaggcgctcccgctcagcatccagccct
agtcccagaagaagtagcagggaaaaagaacagagtaaaactggtggctcttcaaaattt
gattgggctgctcgcttcagccccaaagttagcctgcctaaaacaaaactgtctcttcca
gggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaattagca
agtttaagaaagtctaccaagaagcgcagtgagtctccacctgctgagctccccagtttg
aggaggagcacacgccaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcctgggcaagagaggagcagctgaggcccggaggcaagagaaaatggcagaccctgaa
ggcaaccaggagacagtaaattcctcagctgctcgaacagatgaagctccccaaggagct
gcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagtgaatcc
gatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcctcctcac
ctctttggtcctcttggtcctcggatgtcacaacttttccatagaacaattggaagcgga
gctagttctaaggcccagcagcttcttcaaggactacaagccagtgatgaaagtcaacag
cttcaggcagtcattgaaatgtgtcagctattggtcatggggaatgaagagacactggga
gggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaacataat
tttgacattatgaatcatgcttgccgagccttaacatatatgatggaagcgctccctcgg
tcatctgctgttgtagtagatgctatccctgttttcttagaaaagctgcaagttattcag
tgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacggcgacacagt
aaagccatcttacaggcgggtggtttggcagactgcttgttgtatctcgaattcttcagc
atcaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagcatcacacca
gatgagtttcattttgtggcagattccctaccattgcttacccaaaggctaactcatcag
gacaaaaagtcagtggaaagcacttgcctttgttttgcacgtttagtggacaactttcag
cacgaggagaacttactgcaacaggttgcttccaaagatctactcacaaatgtccaacaa
ctgttggtagtgactccaccaattttaagttctgggatgtttattatggtggttcgcatg
ttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaaacaaaacatt
gcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagagcagatt
gatcttgttccacgaagtcctcaagagctgtatgagctgacatctctgatttgtgaactt
atgccatgtttaccaaaagaaggcatttttgcagtggataccatgttgaaaaagggaaat
gcgcagaatacagatggtgcaatatggcagtggcgagatgaccgaggcctctggcacccc
tataacagaattgacagccggatcattgaggcagcccatcaggtcggtgaggatgagata
agcttgtccactctgggacgagtttatactattgattttaattctatgcagcaaatcaat
gaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagccaatactaac
actagtggatattcagacttaaagaaggatgatgctcgagcacagctcatgaaagaagat
ccggaactggctaagtctttcattaagaccttatttggtgttctctatgaagtgtacagc
tcctcagcagggcctgcggtcagacacaagtgccttagagcaattcttaggataatttat
tttgctgatgctgaacttctaaaggatgttctgaaaaatcatgctgtttcaagtcacatt
gcttccatgctctcaagccaagacctgaagatagtagttggggctcttcagatggcagaa
atcttaatgcaaaagttacccgatatttttagcgtttacttcaggagggaaggagtgatg
catcaagtaaaacatttagcagaatcagagtctttgttgacaagtcccccgaaggcatgt
acaaatgggtctggatccttggggtctacaacaccagccagcagcgggactgccacagca
gcaaccaatgcctctgctgatctggggtcgcctagcttgcagcatagcagagatgattct
ctggatctgagccctcaaggtcgattaagtgatgttctcaagagaaaacgactgccaaaa
agagggccaagaaggccaaagtattcccctccacgagatgatgacaaagtagacaatcaa
gctaaaagccccactactactcagtcacctaaatcttccttcctggcaagcttgaatcca
aaaacatggggaaggttaagcgcacagtccaacagcaacaacattgaaccagcacgaact
gcaggagttagtggtcttgccagggcagcctcaaaagacaccatatccaataatagagaa
aaaattaaaggctggattaaggagcaggcacataaatttgttgagcgttattttagttct
gagaatatggatggaagcaaccctgccttgaatgtccttcagagactttgtgctgcaact
gaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatccgtagcata
gtctcagagtcagatgtttcatcatttgaaatccaacatagtggatttgtgaaacaactg
ttgctgtatttgacatctaaaagtgaaaaggatgctgtcagcagagagatccggttaaag
cgcttccttcatgtatttttttcttctccacttcccggagaagagcctgttggaagagta
gaaccagtgggccatgcgcctttgttggcactggttcacaagatgaacaactgtctcagc
caaatggagcaatttccagtcaaggtgcatgatttccctagtggaaatggatctggaggc
agcttttctctcaacagaggatcacaagctttaaagtttttcaacacacatcagttaaag
tgtcagttacaaagacacccagactgtgcaaacgtgaagcagtggaaaggcgggcctgtc
aagattgatcccctggctctggtgcaagctattgagagataccttgtggttagaggatat
ggaagagtaagagaagatgatgaagacagtgatgatgatgggtcagatgaagaaatagat
gagtctttggctgctcagtttttaaattcgggaaatgtaagacacaggctacagttttat
atcggagaacatttgctaccatataacatgacggtgtatcaggcagtgcggcagttcagc
gtacaggctgaagatgaacgagaatctactgatgatgagagcaatcctctgggaagagct
ggaatttggacaaagactcatacaatatggtacaagcctgtgagagaggatgaagaaagt
agtaaagattgtgttggtggcaaacgggggagagcacaaacagctccaaccaaaacttcc
cccagaaacgcaaagaaacacgatgagttatggcatgatggagtttgcccatcagtagca
aatcctttagaagtttacctcattcccacaccaccagaaaatatcaccttcgaagaccca
tccttagatgtaatactacttttaagagttttacatgccatcagtcgatactggtattac
ttgtatgataatgcgatgtgcaaggagattattccaactagtgaatttattaacagtaaa
ttaacagcaaaggcgaataggcagcttcaagatcctctagtaatcatgacaggaaacatc
ccaacatggctcactgagcttggaaaaacctgcccatttttctttccttttgatacccga
caaatgcttttttatgtaactgcatttgatcgggaccgggcaatgcaaagattacttgat
accaacccagaaatcaaccagtctgattcacaagacagcagagttgcacctagattggat
agaaaaaaacgtactgtaaacagagaggagctactgaaacaagccgaatctgtgatgcag
gaccttggtagctctcgggccatgttagaaatccagtatgaaaatgaggttggtacaggt
ctggggccaacactggagttttatgcacttgtttctcaggaactacagagagctgacttg
ggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaagccaagaagggacc
aagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggacagctaagcca
gctcacatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatggctaaggct
atcatggatttcagattggtggaccttccgcttggcctgcccttttataagtggatgctg
cggcaggaaacttcactgacatctcatgatctgtttgacattgatccggtggtagccaga
tcagtgtatcacctagaagacattgtcagacagaagaaaagactggagcaggataaatcc
cagaccaaagagagtctccagtatgcattggaaactctcacaatgaatggctgttcagtg
gaagatctgggattggattttacgctgcctgggtttcccaacattgaattgaagaaagga
gggaaggatattccagttactatccacaatttggaagaatacctaagattggtgatattc
tgggcactaaatgaaggtgtttgtcggcagtttgactcattcagagatggatttgaatct
gtcttcccgctcagccatcttcagtacttctacccagaagagctggaccagctcctgtgt
ggcagtaaagcagacacttgggatgcaaagacattgatggaatgctgccggcctgatcat
ggctatacacatgacagtcgggctgtgaagttcttgtttgagattctcagtagttttgat
aatgagcagcagaggttgtttctccagtttgtgactggtagcccacgattgccagtcgga
ggatttcggagtttaaatccacctctgacgattgtgcggaagacatttgaatcaacagaa
aacccagatgacttcttaccatctgtaatgacttgtgtgaactatcttaagttaccggac
tactcgagcattgagataatgcgtgacaaactgttgatagcagcaagagaaggccaacag
tcattccatctttcctga
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integrated database retrieval system
