Rattus norvegicus (rat): 84600
Help
Entry
84600 CDS
T01003
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04068
FoxO signaling pathway
rno05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
84600 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
84600 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
84600 (Rag1)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
84600 (Rag1)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
84600 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
84600
NCBI-ProteinID:
NP_445920
RGD:
619790
Ensembl:
ENSRNOG00000004630
UniProt:
A6HNM3
G3V6K9
LinkDB
All DBs
Position
3:complement(108372087..108383184)
Genome browser
AA seq
1040 aa
AA seq
DB search
MAVPLPSTLRLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKDSSEGKPCLEQ
SPVVLDKPGGQNSVLTQRALKLHPKFSKKFHVDGKSSDKAIHQARLRHFCRICGNHFKSD
GHNRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARVFRIDVKSDVDSIHPTEFCHNCWS
IMHRKFGSAHSQVYCPRNVTVEWHPHTPSCDICFTAHRGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVMKKISNCSKIHLSTKLLAVDFPAHFVKSISCQICEHILADP
VETTCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLQSPVKSFLSILNSLMVKCPAQEC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILDGMRSQDLDDYVSGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTVMRVTVEHGSQNVKIFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELLLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTMNSKE
TLGDSLDIEDSLESQDSMEF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccccttgccatctaccctgagactcagttctgcacctgatgaaattcagcac
ccgcacatcaaattttccgagtggaaatttaagctgtttagggtgagatcctttgaaaag
gcacccgaagaagcacaaaaagagaaggattcctcagaagggaaaccttgtctcgagcag
tctccagtagttctagataagcctgggggtcagaattcagttctgactcaacgagcattg
aaactccatcctaaattttcaaagaaattccatgttgatgggaagtcaagcgacaaagca
attcaccaagccaggcttagacacttctgccgcatctgtggcaatcacttcaagagtgac
gggcacaaccggagatacccagtccacgggcccgtggacgctaaaactcaaagccttttc
cgaaagaaggaaaaaagagtcacgtcctggccagatctcattgccagagttttccggatt
gatgtgaagtcagatgttgactccatccaccccactgaattctgccataactgttggagc
attatgcacaggaagttcggcagtgctcacagtcaggtctactgcccaaggaatgtgacc
gtggagtggcacccccacacaccgtcctgtgacatctgctttactgcccatcggggactg
aagaggaagagacatcagcccaacgtgcagctcagcaagaaactaaaaactgtgctcaac
catgctagacgggaccgtcgcaagagaactcaggctagggtcagcagcaaggaggtcatg
aagaagatctccaactgcagtaagattcatctcagtaccaagcttcttgcagtagacttc
ccagcacactttgtgaaatccatctcctgccagatatgtgaacacattctggccgatccg
gtggagaccacctgtaagcacctgttctgtagaatatgcattctccggtgcctcaaggtc
atgggcagctattgtccctcgtgccgatatccatgcttccctactgacctgcagagtccg
gtcaagtcctttctgagcatcttgaattctctgatggtgaagtgtcctgcccaagagtgc
aatgaggaagtaagtctggaaaaatataaccaccatgtctcaagccacaaagaatctaaa
gagactttggtgcatattaataaagggggccggcctcgccagcatctcctgtcactgacg
cgaagggctcagaaacatcggctgagggagctcaagattcaagtcaaagaatttgcagac
aaagaagaaggtggagatgtgaagtctgtgtgcttgacgttgttcctgctggcactgagg
gcaaggaatgagcacagacaagctgatgagctcgaggccatcatgcaaggccggggctcc
ggtcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagccaa
taccataagatgtacaggacggtgaaagctatcactgggaggcagatttttcaacctttg
cacgctcttcgcaatgctgagaaggtcctcctaccaggctaccacccctttgagtggcag
ccccctctgaagaacgtgtcctccagaactgacgttggaattattgatgggctctctgga
cttgcctcctccgtagatgaatacccagtggacacaattgcaaagaggttccgctatgac
tctgctttggtgtctgctttgatggacatggaggaagacatcttggacggcatgagatcc
caagatcttgatgactacgtgagtggtcccttcaccgtggtggtaaaggaatcgtgtgat
ggaatgggggatgtgagtgagaagcacgggagtgggcccgcagttccagaaaaggcagtt
cggttctctttcaccgtcatgagagttacagtagagcatggctctcagaacgtgaagata
tttgaggaacccaagcccaattctgaactgtgttgcaagccactgtgccttatgctggca
gatgagtctgaccacgagacacttactgctattctcagccccctcatcgctgagagggag
gccatgaagagcagtgaattgctgctggagatgggaggcatccccaggacttttaaattt
atcttcaggggcactggatatgacgagaaacttgtcagggaagtagaaggcttggaagct
tctggctcagtctacatttgtacactttgtgatgccacccgtctggaagcctcccaaaat
cttgtcttccactccataaccagaagccacgccgagaatctgcagcgctatgaggtctgg
cggtccaatccctatcacgagtcagtggaagaactccgggaccgggtgaaaggagtctct
gccaaacctttcatcgagacagtcccttccatagatgcgcttcactgtgacattggaaat
gcagctgaattctataagattttccagctggagataggggaagtgtataaaaatcccaat
gcctctaaagaggaaaggaagagatggcaggccaccttggacaaacatctgcggaaaagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtggacgcagtttgtgagttaattccttctgaggagaggcacgaagctctcagg
gagctgatggacctttacctgaagatgaaaccggtgtggcgctcatcgtgtcctgctaaa
gagtgcccggagtccctttgtcagtacagtttcaactcacagcgtttcgctgagctcctc
tccaccaagttcaaatacagatacgagggcaaaatcaccaattactttcacaaaaccttg
gcacacgtccctgaaattattgaaagggatggctctattggggcatgggcaagtgagggc
aatgagtctggtaacaaactgtttaggcgcttccggaaaatgaatgccaggcagtccaag
tgctatgagatggaagatgtcctgaaacaccactggctgtatacttcaaaatacctccag
aagtttatgaatgcccataatgcattaaaaaactctgggtttaccatgaactcaaaggag
actttaggggactctttggacattgaggactctctggaaagccaagattcaatggagttt
taa
DBGET
integrated database retrieval system