Rossellomorea sp. DA94: P8596_00685
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Entry
P8596_00685 CDS
T10138
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rod Rossellomorea sp. DA94
Pathway
rod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8596_00685 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rod03021
]
P8596_00685 (rpoB)
03400 DNA repair and recombination proteins [BR:
rod03400
]
P8596_00685 (rpoB)
Enzymes [BR:
rod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8596_00685 (rpoB)
Transcription machinery [BR:
rod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8596_00685 (rpoB)
DNA repair and recombination proteins [BR:
rod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8596_00685 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WGG45791
LinkDB
All DBs
Position
127496..131053
Genome browser
AA seq
1185 aa
AA seq
DB search
MTGQLVQYGRHRQRRSFARISEVLELPNLIEIQTSSYQWFLDEGLREMFRDISPIEDFTG
NLSLEFIDYSLGEPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTEGIDKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKMNKKLHIKNRLFGQTLAETLADPETG
EILAEKGTVLDRRALDKVIPYLENGIGFKNYQQSGGVLEEDVVLQSIKIYSPNEEGDFEI
NVISNAYVEEEVKYITPADIISSISYFFNLLHGVGLTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNKFG
FIETPYRRVDPDTGKVTDRIDYLTADEEDNYVVAQANARLGDDGAFLDEEVISRFRGENT
VIKRERLDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTG
MEHVSAKDSGAAVICKYEGIVEKVEAKQVWVRRVKEIDGQEVKGDLDKYRMQKFIRSNQG
TCYNQRPIVSEGDRVVKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHVASPVFDGAREEDVWATIEEAGMARDAKTVLYDGR
TGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSSNEEEIEMRDLEDEEEVQQADTLNISESNAQESETVGSKE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgcagaagttttgcgcgtatc
agtgaagttttagaattaccgaatttaatcgaaattcaaacttcctcgtatcaatggttt
cttgatgaggggttaagagaaatgttccgtgacatttctccgattgaggacttcactggt
aatctctctttggaatttattgattatagtctgggagagccaaagtactcggtggaagaa
tcaaaggaaagagatgttacttactctgcaccgcttagagtaaaagtccgtcttgtgaac
aaggaaacaggagaagtgaaagatcaagacgtatttatgggtgatttcccattaatgaca
gacacaggtacgtttgtcatcaatggtgctgagcgcgttatcgtatctcagctagtgcgt
tcccctagtgtttactttagcggaaaagtagataaaaacggaaagaaagggtttactgct
accgttataccaaaccgcggagcttggcttgagtatgaaacagatgcaaaagatgttgta
tatgtgcgaattgatcgaactcgcaaactaccggtaacggttcttttacgtgcccttggg
tttggctctgatcaagaaatcatcgatttgatcggtgataatgagtacattcgtaacacg
ctcgagaaagacaacacggaaggtatcgacaaggcattgctcgagatttatgagcgtctg
cgtccgggagagcctcctacagtagaaaatgcaaaaagtttactcgtttctcgtttcttt
gatcctaagcgttatgacttagcaaacgttggacgttacaaaatgaacaaaaagcttcac
attaagaatcgtttattcggtcaaactctagcagaaactctagcagatccggaaacgggc
gagattctggcagagaaaggcacggttcttgaccgtcgcgccctggataaggtcatccct
tatttagaaaacggcattggtttcaaaaactaccaacagtccggcggcgtattagaagaa
gacgtagttcttcaatctatcaaaatctattctcctaacgaagagggagattttgaaatc
aacgtaatcagcaacgcgtatgttgaagaagaggttaagtacattacacctgctgatatc
atctcttccatttcttacttctttaacttgttacatggagtaggactgacagatgatatt
gaccatttaggtaaccgtcgtttacgttcggttggtgaattgctacagaaccaattccgt
atcggtttatcacgtatggagcgtgtggtccgtgaaagaatgtccattcaggacacgaac
acgatcactcctcaacaactgatcaacatccgtcctgttattgcatccattaaagagttc
tttggaagctctcaattgtctcaattcatggatcaaacgaatcctcttgcagaattaacg
cacaaacgccgtctttctgctttagggcccggtggattaacgcgtgaacgtgctggattc
gaagtacgtgacgtccattattcccactatggccgtatgtgtccgattgaaacacctgag
ggtccgaacatcggactgatcaactcactttcctcctttgcgaaggtgaataaattcggc
tttatcgaaacgccgtatcgtcgtgtcgaccccgataccgggaaagtaaccgatcgcatc
gattacttgacggcagacgaagaagataactatgtagtggcacaggcgaacgcacgtctt
ggagacgacggtgcattccttgatgaagaagtcatctcccgtttccgcggtgagaacacg
gtcatcaagcgtgaacgtctcgactacatggatgtatctcctaaacaagtagtatcagct
gcgacagcatgtatcccgttcttagagaacgatgactccaaccgtgctctaatgggagcg
aacatgcagcgtcaagcagtacctttgatgaatccggaatcaccgatcgtcggaacgggt
atggaacacgtatctgcgaaagactccggtgcagctgtgatctgtaaatacgaaggtatt
gtggagaaggttgaagcgaaacaagtttgggtgcgtcgtgtgaaagaaatcgacggtcag
gaagtaaaaggtgacctcgataagtatcgtatgcagaaattcatccgttctaaccaaggt
acatgttacaaccagcgtccaatcgtaagtgaaggcgaccgtgtagtaaaaggtgaaatc
cttgctgatggcccttcaatggaaaaaggtgagttagccttgggacgtaacgtcatggtt
ggattcatgacttgggacggttacaactatgaagatgcgatcatcatgagtgagcgtctt
gtaaaagacgatgtctatacttctattcatattgaagaatatgagtcagaatcccgtgat
acgaaattgggacctgaagaaatcactcgtgatattcctaacgttggtgaagatgcactt
cgcaatcttgatgagcgtggaatcatccgtatcggtgctgaagtaaaagatggcgacctg
cttgttggtaaagtaacgcctaaaggtgtaacggaactgacagctgaagagcgtctatta
catgcaatcttcggtgagaaggcccgtgaagtccgggatacatcccttcgcgtaccacac
ggtggcggcggaatcatccttgatgtaaaagtcttcaaccgtgaagatggcgatgaatta
ccaccaggtgtgaaccagcttgtacgtgtatacatcgttcagaaacgtaagatctctgaa
ggtgacaaaatggctggtcgtcacggtaacaaaggtgttatctcaagaatccttcctgaa
gaagacatgccgttcttaccagacggcacaccaatcgatatcatgcttaacccactaggg
gtaccatcacgtatgaatatcggtcaggtgcttgagcttcacttgggaatggcagcaaga
tacctcggcattcatgtcgcttcaccagtatttgatggagcacgtgaggaagatgtatgg
gcaacaattgaagaagcaggtatggcacgcgatgccaaaaccgttctttacgatggtaga
acgggtgaaccgtttgataaccgtgtatcagttggaatcatgtatatgatcaaacttgct
catatggttgatgacaaacttcacgcacgttcaaccggaccttattcacttgttacgcaa
cagccactcggtggtaaagcccaattcggtggacagcgtttcggtgagatggaggtatgg
gcacttgaagcttatggtgctgcttacactctacaagaaattcttacagttaagtccgat
gacgttgtgggccgtgtgaaaacatacgaagccatcgtcaagggtgaaaacgttcctgaa
cctggtgttccggaatcattcaaagttctgatcaaagagcttcaaagtttaggtatggat
gttaagatcctctctagtaacgaagaagaaatcgaaatgcgggacttagaggacgaagaa
gaagtacaacaagcagacacgctaaatatctctgaatctaatgcacaagaatccgagaca
gtagggtctaaagaataa
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integrated database retrieval system
