KEGG   Rossellomorea sp. DA94: P8596_10725
Entry
P8596_10725       CDS       T10138                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
rod  Rossellomorea sp. DA94
Pathway
rod02024  Quorum sensing
rod03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rod00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P8596_10725 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    P8596_10725 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rod03019]
    P8596_10725 (hfq)
   03036 Chromosome and associated proteins [BR:rod03036]
    P8596_10725 (hfq)
Messenger RNA biogenesis [BR:rod03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     P8596_10725 (hfq)
Chromosome and associated proteins [BR:rod03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    P8596_10725 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WGG47641
LinkDB
Position
2078051..2078284
AA seq 77 aa
MKQSINIQDQFLNQLRKDGSLVTVFLLNGFQIRGQVKGFDNFTVLFETEGKQQLVYKHAI
STFAPQRNVQINFEEQN
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaacaatccattaatatccaagatcaattcctaaatcaattgcgaaaagacggttca
ctcgtaacggtattccttttaaatggcttccagattcgcggtcaggtaaaggggtttgat
aattttaccgtcctttttgaaacagaaggtaaacagcaactggtatataaacatgccatt
tcaacattcgccccgcagcgaaatgttcaaataaattttgaagaacaaaattaa

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