Rossellomorea sp. DA94: P8596_10725
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Entry
P8596_10725 CDS
T10138
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
rod Rossellomorea sp. DA94
Pathway
rod02024
Quorum sensing
rod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8596_10725 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P8596_10725 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rod03019
]
P8596_10725 (hfq)
03036 Chromosome and associated proteins [BR:
rod03036
]
P8596_10725 (hfq)
Messenger RNA biogenesis [BR:
rod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
P8596_10725 (hfq)
Chromosome and associated proteins [BR:
rod03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
P8596_10725 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
WGG47641
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All DBs
Position
2078051..2078284
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AA seq
77 aa
AA seq
DB search
MKQSINIQDQFLNQLRKDGSLVTVFLLNGFQIRGQVKGFDNFTVLFETEGKQQLVYKHAI
STFAPQRNVQINFEEQN
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatccattaatatccaagatcaattcctaaatcaattgcgaaaagacggttca
ctcgtaacggtattccttttaaatggcttccagattcgcggtcaggtaaaggggtttgat
aattttaccgtcctttttgaaacagaaggtaaacagcaactggtatataaacatgccatt
tcaacattcgccccgcagcgaaatgttcaaataaattttgaagaacaaaattaa
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