Rickettsia oklahomensis: AAGW17_00210
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Entry
AAGW17_00210 CDS
T11123
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rof Rickettsia oklahomensis
Pathway
rof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAGW17_00210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rof03021
]
AAGW17_00210
03400 DNA repair and recombination proteins [BR:
rof03400
]
AAGW17_00210
Enzymes [BR:
rof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAGW17_00210
Transcription machinery [BR:
rof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAGW17_00210
DNA repair and recombination proteins [BR:
rof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAGW17_00210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
XBG66342
UniProt:
A0AAU7BYX5
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All DBs
Position
complement(48103..49125)
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AA seq
340 aa
AA seq
DB search
MLSLSKNWNALIKPNKVAYENFAENNNKAKVVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEMILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPSHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAVDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDLLPEMAVGLAARILQEQLQFFISFEEQEE
DKQVKTDVLPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDIPDWPPENIQELSKRYEDSDN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatgctttaataaagccgaataaagtcgcttatgaa
aattttgcggaaaacaataataaagctaaagttgtagtcgaacctttagaaagaggtttt
ggtttaactttaggtaatgctatgagaagggtgttactttcttctttacaaggggcggcc
atcacttctataaaaattcctgctatagaacatgaattttcttctatacctggtgtaaaa
gaagatgtatcggagatgatcttaaatattaaaggtattgaagtaaagatgcatgttgcg
gaaaaacgtatcatgaagttaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gaaacagggcatgatgtagaaatactgaatccgagtcatgtaatttgtaatcttgctaaa
aataagcagcttgaaatggaattaacttgtaaggttggtaaaggatacgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctgtagatgctttatttaatcca
gtaaagagtgttacttataaggtagaaaatactagagtaggtcaggttaccgactatgat
aagttaattatgtttgtagaaactaacggtgatttgttacctgaaatggctgtagggtta
gctgcacgtatcttacaagaacaattacaattctttatttcttttgaagaacaggaagaa
gataagcaggttaaaactgatgttttaccgttttcaccgtatttacttaaaagagttgat
gaattagaattatcggttagatcagcaaattgtttgaaaaatgataatataatatatata
ggtgatctagtaaagagaacagaatctgatatgctgagaactccaaattttggtagaaaa
tctttaaatgagattaaagaaatattagcaaaatttaatttaaggtttggtatggatata
ccggattggccaccagaaaatattcaggaattatctaaacgttatgaagattctgataat
taa
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