Raoultella ornithinolytica B6: RORB6_16340
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Entry
RORB6_16340 CDS
T02625
Name
(GenBank) hypothetical protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ror03000
]
RORB6_16340
Transcription factors [BR:
ror03000
]
Prokaryotic type
Helix-turn-helix
Other families
RORB6_16340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
MarR
TetR_N
LacI
HTH_Tnp_1
HTH_Crp_2
TnsD
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AGJ87949
LinkDB
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Position
3594993..3595736
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AA seq
247 aa
AA seq
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MDIVGQLQEGLVRFSAQESRVAAFILKNLSFTASASIDELAASAGVSPATITRFARSVGC
EDIRDLRKQLAQASERRASWLAPDSNALPAAWRDALSYLGSTLAQQLANTSETAVEKLKS
RLREARAVHCFALGAQDTALASLLQHQLLPAGIAINLCQDASLMRMTASTLSDDHLLLVL
VTAEADTVLQSATLQARTQGVTIIALTPPQHALANMAADIIPLPDSPQLARYALLLLVDL
LNDTLMA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgtaggtcagttgcaggaagggttagttcgttttagcgctcaggagtcgcga
gtcgccgcgtttatcctgaaaaacttaagctttaccgccagcgcttctatcgatgaactg
gccgccagcgccggcgtcagcccggcgacgatcacccgctttgcccgctccgtcggctgc
gaggatattcgcgatctgcgcaaacagctggcgcaggccagcgagcgccgcgccagctgg
ctggcgccggacagcaatgccctgcccgccgcctggcgggacgcgctgagctatcttggc
tccaccctcgcccagcagctggcgaatacctcggaaacggcggtggaaaagctcaaatcc
cggctgcgcgaggcccgcgccgtccactgctttgccctcggcgcccaggatacggcgctg
gcatcgctactccagcatcagctgctgcccgccggcattgccattaacctgtgtcaggat
gcctcgctgatgcgcatgaccgccagcaccctcagcgacgatcatctgctgctggtgctg
gtgaccgccgaggccgatacggttttacaaagcgcaacgctccaggcgcgaacccagggc
gtcaccatcatcgcgctaacgccgccacagcatgcgctggccaatatggccgccgatatt
attccccttcccgatagtccgcagctggcacgctatgccctgctgctgctggtcgatctg
ctcaatgacaccctgatggcctga
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