Rhodopseudomonas palustris BisB5: RPD_3195
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Entry
RPD_3195 CDS
T00345
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPD_3195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpd03021
]
RPD_3195
03400 DNA repair and recombination proteins [BR:
rpd03400
]
RPD_3195
Enzymes [BR:
rpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPD_3195
Transcription machinery [BR:
rpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPD_3195
DNA repair and recombination proteins [BR:
rpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPD_3195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABE40421
UniProt:
Q134R8
LinkDB
All DBs
Position
complement(3543944..3548068)
Genome browser
AA seq
1374 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIREVAEMPNLIEVQKASYDQFLMVAEPPGGRDDEGLQAVFRS
VFPISDFSNASMLEFVRYEFEPPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGARS
VKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMFALGLDGEEILSTFYKKILYKRI
KEGWRVPFDANRFRGYSTVNDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRLSDEE
LVGNYLAEDLVNPKTGEIYAEAGEEITEKSLKALNEEGYKELPLLDIDHVNIGPYIRNTL
SADKNMTREDALFDIYRVMRPGEPPTLDSAQNMFQSLFFDSERYDLSAVGRVKMNMRLDL
DAPDTHRTLRKEDILAVIKTLVGLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKEGRVTDEVVYLSAMEEGRYAVAQANISLDAKGRFTDDLIVCRAGGTRDVVLIPADQ
VDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVA
RDSGAAIAARRTGVIDQIDATRIVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPL
VKVGDSVAKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTS
IHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIER
EEIERLAKDRDDEQAILDRNVYGRLADLLDNRQGVSGPKGFKKDTKITRAVLEEYPKSQW
WLFAAPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHL
GWACAGMGKKIGQTIDAYYQRQDLKPLRETLKKIYGDDETIKSLNDGELIELGRNLSHGV
PIATPVFDGAKEADIEEMLKLAGFDASGQSTVYDGRTGDEFDRKVTVGYIYMLKLHHLVD
DKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAG
RTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKLGVPPPAEAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacgttcaccggtcgcaaacgcgttcgcaagttctttggtcacatccgg
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcgtcttacgaccagttcctg
atggtcgccgaacctcccggaggtcgggatgacgagggcttgcaagcggtcttccggtcg
gtgtttccgatctcggacttctccaacgcctcgatgctggaattcgttcgctacgaattc
gagccgccgaaatacgacgtcgacgagtgccgccagcgcggcatgacctatgctgcgccg
ctgaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgcccgttcg
gtcaaggacatcaaggagcaggacgtctacatgggcgatattccgctcatgacgatgaac
ggcaccttcgtggtcaatggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccg
ggcgtgttcttcgatcacgacaagggcaagacccattcgtcgggcaagctgctgttcgcc
gcccgcgtcatcccctatcgcggctcctggctcgacatcgagttcgacgccaaggacatc
gtgttcgcgcgtatcgaccgtcgccgcaagattccggtgacgtcgctgatgttcgcgctc
gggctcgacggcgaagagatcctgtcgaccttctacaagaagattctctacaagcggatc
aaggaaggctggcgcgtgccgttcgacgccaaccgcttccgtggctactcgaccgtcaac
gacctgatcgacgccgacaccggcaaggtcgtgctcgaggccggcaagaagctgaccgtg
cgcgcggcgcgccagttgcaggaaaagggcctcaaggcgctgcggctgtccgacgaggaa
ctggtcggcaactatctcgccgaagatctggtcaacccgaagaccggcgagatctatgcg
gaagccggtgaggaaatcaccgagaagtcgctgaaggcgctgaacgaagaaggctacaag
gagctgccgctcctcgacatcgatcacgtcaatatcggtccctacatccgcaacacgctc
tcggccgacaagaacatgacgcgcgaagacgcgctgttcgacatctaccgggtgatgcgc
ccgggtgagccgccgacgctcgactccgcgcagaacatgttccagtcgctgttcttcgat
agcgagcgctacgacctgtccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgatacccatcgcaccctgcgcaaggaagacatcctcgccgtgatcaagacc
ctggtcggcctgcgggacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgggtgcgctcggtcggcgagctgatggagaaccagtaccgcatcggcctgctccgcatg
gagcgcgcgatcaaggagcggatgtcgtcggtcgatatcgacacggtgatgccgcaggac
ctgatcaacgccaagccggcggccgccgcggtgcgcgagttcttcggctcgtcgcagctg
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgtctttcg
gcgcttggcccgggcggtctgacccgcgagcgcgcgggcttcgaagtccgcgacgtgcat
ccgacccactatggtcgtatctgcccgatcgagacgccggaaggcccgaacatcggtctg
atcaattcgctggcgaccttcgcccgcgtcaacaaatacggcttcgtcgagactccctat
cgcaaggtcaaggaaggccgcgtcaccgacgaggtggtctacctctcggcgatggaagag
ggccgctacgcggtggcccaggccaacatctcgctcgacgccaagggccgcttcaccgac
gacctgatcgtctgccgcgccggcggcacgcgtgacgtcgtgctgatcccggccgaccag
gtcgactacatggacgtgtcgccgaagcagctcgtttcggtcgccgcggcgctgatcccg
ttcctcgagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcg
gtgccgctggttcgcgccgaggcgccgttcgtcggcaccggcatggaaggcgtggtcgcg
cgtgactcgggcgcggcgatcgccgcgcgccgcaccggcgtgatcgaccagatcgacgcc
acgcgtatcgtcatccgcgccaccgaagacctcgatccgaccaagtcgggcgtcgatatc
taccggctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgcccgctg
gtgaaggtgggcgacagcgtcgccaagggcgacatcatcgcggacggtccgtcgaccgac
ctcggcgaactcgcgctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctac
aacttcgaagactcgatcctgctctccgagcggatcgtgaaggaagacgtcttcacctcg
atccacatcgaggaattcgaagtgatggcccgcgacaccaagctgggccctgaggaaatc
acccgcgacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggcatc
gtctatatcggcgccgaagtccgcgccggcgacatcctggtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgaaaaggcc
tcggacgttcgcgacacctcgctgcgggtgccgcccggcgtgcagggcaccatcgtcgaa
gtccgcgtcttcaaccgccacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgg
gaagagatcgaacgcctcgccaaggaccgcgacgacgaacaggcgattctcgaccgtaac
gtctacggccgtcttgccgacctgctcgacaaccgtcagggcgtctccggcccgaagggc
ttcaagaaggacaccaagatcacccgcgcggtgctcgaggaatatccgaagtcgcagtgg
tggctgttcgccgcgccgaacgacaagctgatggccgagatcgaggctatgcggaagcag
tacgacgagtcgaagaagggccttgaacagcgcttcctcgacaaggtcgagaagctgcag
cgcggcgacgagctgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaag
cgcaagatccagccgggcgacaagatggccggccgccacggcaacaagggcgtggtgtcg
aagatcgtgccgatcgaggacatgccgttcctcgaagacggcacccatgccgacatcgtg
ctgaacccgctcggcgtgccgagccgcatgaacgtcggtcagatcctcgagacccatctc
ggctgggcctgcgccggcatgggcaagaagatcggccagaccatcgacgcctattatcag
aggcaggatctcaagccgctgcgcgagaccctgaagaagatctacggcgacgacgagacc
atcaagtcgctcaacgacggcgaactgatcgagctcggccgtaacctcagccatggtgtc
ccgatcgccacgccggtgttcgacggcgccaaggaggcggacatcgaggagatgctgaag
ctcgcgggcttcgacgcctccggccagtcgaccgtctatgacggccgcaccggcgacgag
ttcgatcgcaaggtcacggtcggctacatctacatgctgaagctgcatcacctcgtggac
gacaagatccacgcccggtcgatcggtccgtactcgctcgtcacccagcaaccgctgggc
ggcaaggcgcagttcggcggccagcgcttcggcgaaatggaggtgtgggcgctcgaagcc
tacggcgccgcctacacgctgcaggaaatgctgacggtgaagtccgacgacgtcgccggc
cgcaccaaggtgtacgaagcgatcgtgcgcggcgacgacacgttcgaggccggtattccg
gaatcgttcaacgtgctcgtgaaggaaatgcgctcgctcggcctcaacgtcgacctgcac
aactccaagctgggcgtgccgcccccggccgaggcggccgagtaa
DBGET
integrated database retrieval system
