Rhizobium phaseoli: AMC79_CH01710
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Entry
AMC79_CH01710 CDS
T04590
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMC79_CH01710 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpha03021
]
AMC79_CH01710 (rpoB)
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH01710 (rpoB)
Enzymes [BR:
rpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMC79_CH01710 (rpoB)
Transcription machinery [BR:
rpha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMC79_CH01710 (rpoB)
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMC79_CH01710 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
ANL97517
UniProt:
A0A192TAJ7
LinkDB
All DBs
Position
1731184..1735323
Genome browser
AA seq
1379 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPITDFSGASMLEFVSYEFEPPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTNNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYKR
DGEGWRIPFKPETLKGAKAITEMVDADTGEVVVEAGKKLTPRLLRQLSDKGLKALKAGDD
DLYGNYLAEDIVNYSTGEIYLEAGDEIDEKTLGIILSNGFDEIPVLGIDHINVGAYIRNT
LSADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LTVEDTVRILRKDDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRIVDGKVTNDVLYLSAMEEAKYYVAQANAEMNPDGSFVDEFVVCRHAGEVMLAPRDSM
NLMDVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIGARRGGVVDQVDATRIVIRATEDLEAGKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVVNRGDILADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTIVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLIDMLRGQVSIAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKVQSELEALRGQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGRQIGELIEAYKANGNIEPLRKTIGDVVGAGPKAEQVHEFDDESVLRLADQWKR
GVSIATPVFDGANEGDVNDMLRLAGLKDTGQSTLYDGRTGEQFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENTKLDEAQATQLPDAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgttcaacggtcgcaggcgcgtacgcaagttttttggtaagatc
cccgaagtcgcagaaatgccgaacctcatcgaggtccagaaggcgtcctacgaccaattt
ctgatggtggaagagccgaagggcggccggcccgacgagggtcttcaggccgtcttcaag
tcggttttcccgatcaccgatttctccggcgcctcgatgctggaattcgtatcctacgag
ttcgagccgccgaagttcgacgtcgacgaatgccgccagcgcgacctgacctatgccgcg
ccactgaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggataccggcgcgaaa
tccatcaaggacatcaaggaacagtcggtctacatgggcgacatgccgctcatgaccaac
aacggcacgttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcg
ccgggcgtcttcttcgaccatgacaagggcaagagccattcttccggcaagctgctcttc
gctgcccgtgtcattccctatcgcggttcctggctcgatatcgaattcgacgccaaggac
atcgtctacgcccgtatcgaccgccgccgcaagattccggtgacgtcgctgctgatggcg
ctcggcatggacggtgaggaaatcctcgacaccttctacacgaagtcgctctacaagcgc
gacggcgaaggctggcgcattcccttcaagccggaaacgctgaagggtgccaaggcgatc
accgagatggtcgacgccgataccggcgaagtcgtcgtcgaagccggcaagaagctgacc
ccgcgtctgctgcgtcagctttccgataagggcctgaaggccctgaaggccggcgacgac
gacctttacggcaattacctcgccgaagacatcgtcaactactccaccggtgaaatctat
ctcgaggccggcgacgaaatcgacgagaagacgctcggcattatcctgtcgaacggtttc
gacgagatcccggttctcggcatcgaccatatcaatgttggcgcctatatccgcaacacg
ctgtcggctgacaagaacgagaaccgtcaggacgctctgttcgacatctaccgtgtcatg
cgtccgggtgaaccgccgaccatggaatcggccgaagccatgttcaactcgctgttcttc
gatgcggagcgttacgacctctccgccgtcggccgcgtgaagatgaacatgcgtctcgac
ctgaccgtcgaagacaccgtccgcatcctgcgcaaggacgacatcctggctgtggtcaag
atgctggtcgaactgcgcgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgttcgctcggtcggcgagctgatggagaaccagtaccgtctcggcctgctgcgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgagatcgacacggtcatgccgcag
gatctgatcaacgccaagccggctgccgcagccgtgcgcgaattcttcggttcctcgcag
ctctcgcagttcatggaccaggtcaacccgctctcggaaatcacccacaagcgccgcctt
tcggctcttggcccgggcggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtg
catccgacccattacggccgcatctgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgcttgcgacctttgcccgcgtcaacaagtacggcttcatcgaaagcccg
taccgtcgcatcgtcgacggcaaggtgacgaacgacgtgctctacctctccgccatggaa
gaggcgaagtattacgtcgctcaggccaacgccgagatgaaccctgatggttctttcgtc
gatgaattcgtcgtctgccgtcatgccggcgaagttatgctggcgccgcgcgacagcatg
aacctgatggacgtttcgccgaagcaggtcgtttcggtcgcagccgcgctcatcccgttc
ctggaaaacgacgacgccaaccgcgccctcatgggctcgaacatgcagcgtcaggccgtg
ccgctgctgcgcgccgaagcaccgttcgtcggcaccggcatggagccggtcgtcgcccgt
gactcgggtgctgccatcggcgcccgccgcggcggcgtggtcgaccaggtcgacgcgacc
cgtatcgttatccgcgccacggaagacctcgaagccggcaagtccggcgtcgatatctac
cgcctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgcccgctggtc
accgtcggtgacgtcgtcaaccgcggcgacattctcgccgacggcccgtcgaccgatctc
ggcgacctggcgctcggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaac
tacgaagactcgatcctgctctccgagcggatcgttgccgacgacgtgttcacctccatc
cacatcgaagaattcgaagtgatggcgcgcgacaccaagctcggtcctgaggaaatcacc
cgcgatattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tatatcggcgccgaagttcagccgggcgatattctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgagaaggcctcc
gacgtgcgcgacacctccatgcgcatgccgcccggcacctacggcacgatcgtcgaagtt
cgcgtcttcaaccgccatggcgtcgagaaggacgagcgtgcgatggcgatcgagcgcgaa
gagatcgagcgtcttgccaaggaccgcgacgacgagcaggcgatcctcgaccgtaacgtc
tacggccgtctgatcgacatgctgcgcggccaggtctcgattgccggcccgaagggcttc
aagaagggcaccgagctttcgaacgccgtcgtctccgaatatccccgctcgcagtggtgg
atgttcgcggtcgaggacgagaaggtccagagcgaactcgaagcgctccgcggccagtac
gacgaatccaagtcgcgccttgagcagcgcttcatggacaaggtcgagaaggtccagcgc
ggcgatgaaatgcctcctggcgtcatgaagatggtcaaggtcttcgtcgccgtgaagcgc
aagatccagccgggcgacaaaatggccggccgtcacgggaacaagggcgtggtttcgcgc
attgtgcctgtcgaggacatgccgttcctcgaagacggcacgcatgtcgatgtcgttctg
aacccgctcggcgtgccatcgcgcatgaacgtcggccagatcctcgaaacgcatctgggc
tgggcttgcgccggcatgggtcgccagatcggcgaactgatcgaagcttacaaggcgaat
ggcaacatcgagccgctgcgcaagaccatcggcgatgtcgtcggtgccggtccgaaggcc
gagcaggtccacgaattcgacgatgagtcggttctgcgccttgccgaccagtggaagcgc
ggcgtttcgattgcaacgcctgttttcgacggtgccaacgaaggcgacgtcaacgacatg
ctgcgtctggcgggtctcaaggacaccggccagtcgacgctctatgacggccgtaccggc
gagcagttcgaccgccaggtcacggtgggctacatctacatgctgaagctcaaccacctg
gtcgacgacaagatccatgctcgctcgatcggtccttactcgctcgtgacccagcagccg
ctgggcggcaaggcgcagttcggcggtcagcgcttcggcgaaatggaagtctgggcgctc
gaagcttacggcgcggcctacacactgcaggaaatgctgacggtgaagtcggacgacgtc
gccggccgcaccaaggtctacgaagccattgtccgcggagacgatacgttcgaagccggt
attccggaaagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctcagcgtcgag
cttgagaacaccaagcttgacgaggcgcaggcaacccagctgcccgacgcggccgagtaa
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integrated database retrieval system
