| Entry |
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| Name |
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
|
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| KO |
|
|---|
| Organism |
rphi Ruditapes philippinarum (Manila clam)
|
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| Brite |
KEGG Orthology (KO) [BR:rphi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:rphi03016]
132717514
Enzymes [BR:rphi01000]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
132717514
Transfer RNA biogenesis [BR:rphi03016]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
132717514
|
|---|
| SSDB |
|
|---|
| Motif |
|
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| Other DBs |
|
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| LinkDB |
|
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| Position |
Unknown
|
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| AA seq |
289 aa
MSSDKELLKIQQLDKDFFVWNSNDARCLRENYKIVGTLIGCLPRAPRQNAQLGLPLQLMP
EEVRLLIDIGVAEVVTEGYIKPTVEDIRKYEQNKEESYKEQIELFRNDRRDEIRRKLPDI
IEGKKKKRNKLLLERREKGEHIDDAEFEKEIEMNADSVEIPPIRREHMLLQIHGVCTFRQ
KSCHAVDWQFPCTNEEKLRYRVYRDFWERGHFLTLGSKFGGNFLVYPGDPSRFHSFFIAI
CKPHKEKMTALDVVSMGRLGTSVKKTVVICSEDENGQLCYTSLQWTGIS |
|---|
| NT seq |
870 nt +upstreamnt +downstreamnt
atgtcatcggataaagaactattaaagatacagcaattggataaagacttttttgtttgg
aattcaaatgatgcaaggtgtttacgtgaaaattataagatagttgggaccctgattgga
tgtttaccaagagctcctcgtcagaatgcccagttaggtttaccactacagttaatgcca
gaggaagttaggctattaatagatattggggtagctgaggtggtaactgagggatatata
aagccaactgtggaggatatcagaaaatatgagcagaataaagaagaaagttataaagag
cagattgaattgttccgaaatgacagacgagatgagatacgacgtaaactgccggacatt
atagaaggcaagaagaaaaagagaaataaactattgttagagaggcgagagaaaggtgaa
cacatagatgacgctgagtttgaaaaagaaatagaaatgaatgcggactcagtggagatt
ccaccaatacgtcgtgaacacatgctgcttcaaattcatggagtttgtacgttcagacaa
aagtcctgtcatgctgttgattggcagttcccttgtaccaatgaagagaaactacgatac
agagtttacagggacttctgggaacgcggtcactttctaacactgggtagtaaatttggt
gggaacttccttgtgtacccaggcgatccttccagatttcactcgttttttattgcaata
tgtaaaccccacaaggaaaagatgacggcactagatgttgtatcaatgggaagactcggt
accagcgttaaaaagactgttgtgatttgttccgaggacgaaaatggacagctgtgttac
acttctttacaatggacaggaattagctga |
|---|
