Ruditapes philippinarum (Manila clam): 132729437
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Entry
132729437 CDS
T09557
Name
(RefSeq) signal transducer and activator of transcription 5A-like isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
132729437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132729437
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
132729437
BRITE hierarchy
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Motif
Pfam:
STAT_bind
STAT_alpha
STAT_int
STAT_linker
Motif
Other DBs
NCBI-GeneID:
132729437
NCBI-ProteinID:
XP_060571185
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MALWAKVQQLPQESLSQVQSAYSTYFPMEVRHYFAEWIENQPWKDIDDTNPAHEVYASKL
FAQIMELIEAKALDSTLDFFVRLNLQNFAKQFKDVYSNQPMNLVRVVRNCLINEETLVRA
AAECGSPSGVTTMQATLDDKTRQEIKACMDLLDKKTDETDQDLRHMQLKQEKFVIDYQNQ
DKISANLAHIQQQPQSANRTELETKFKQEKEEMDRQLLSAAQQILQQRLSLASKHNDTLG
MLDKLTKRVVDDELIAWRQKQKLALNGAPFDTSMIDVLQKWCEVLADLIWRNRMQIIKVD
LLRQQLPIDIPQGQTDLQPDLNRIVTGLLSSLVTSTFIVEQQPPQVLKKDSRFTATVRLL
VGGKLNLQLTPPRVTATIISEQQARTFLQNEDRRQHQKCGDILNNEGPMDYHQHSGQLSI
TFRNMSLKNIKRADRRGAEVHTVAEEKFCIYFSSDFNVGGNELKFQVWTLSLPVVVTVHG
NQECQATATYLWDNQFSEPGRIPFQVPDKVPWSEVAKMLSTKFCAMTGRGLSDINLKYLG
NKLFGMSGTVDFSSAVVSWTQFNKVNKY
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtgggccaaggtccagcaattacctcaggagtccttaagccaagtacagagt
gcctacagtacttactttcctatggaagtgaggcattattttgcagaatggatagaaaat
cagccatggaaagatatagatgatactaacccagctcatgaggtgtatgcgagtaaattg
tttgctcagattatggagcttatagaagctaaagctcttgactcaacattggacttcttt
gtaaggttgaacctccagaactttgctaaacaattcaaggatgtgtacagtaaccagcca
atgaaccttgtacgtgttgtacgtaattgtctcatcaatgaggaaactctggtcagagct
gcagcagaatgtggttcaccttcaggtgttacaacaatgcaggcaaccttggatgacaag
acgagacaggaaattaaagcctgtatggatctccttgataaaaaaacagatgagactgat
caagatttacgtcatatgcagctaaaacaggagaaatttgtgatagactaccaaaaccaa
gataaaatttcagcaaaccttgcacacattcagcaacagccacagagtgcaaatcgtaca
gaactagagacaaagtttaaacaagaaaaagaagaaatggacaggcagctactgtctgct
gctcaacaaattctacaacaaagactgtcattagcaagcaaacataacgacacattggga
atgctggataagttaacaaagcgtgttgttgatgatgaattgattgcctggagacagaaa
caaaagttggcactgaatggagcaccatttgatacttcaatgattgatgtgcttcagaaa
tggtgtgaagtgttagcagaccttatttggcgaaacagaatgcagataattaaagtagat
ttattacgacagcaattaccaatagacattcctcaaggtcaaaccgaccttcaaccagat
cttaaccgtatcgtaaccggtctactctccagccttgttaccagtacattcatagtagaa
cagcagcctcctcaagttttgaagaaagactcaaggtttacagcaactgtacgactgttg
gtaggtgggaaactcaatcttcaactcactccaccgagagttacagctacaattatcagt
gagcagcaagcaagaacattcttacagaatgaggacaggaggcagcatcagaaatgtgga
gatattttaaataatgaaggtcccatggactatcatcagcattcaggacaactgagtatc
acatttagaaatatgtcattgaagaatatcaagcgtgcagatagaagaggggcggaggta
catacagtagcagaggagaaattttgtatctatttctcatcggactttaatgttggtggt
aacgagttaaagtttcaggtctggactctgtcattgccagtagtggtcactgtacatggt
aaccaggaatgccaggctacagcaacttatctctgggacaaccagttctcggaaccggga
agaataccctttcaagtgccggacaaagttccttggtcagaggtagctaaaatgctgtct
acaaagttctgcgcaatgactggacgaggtcttagtgacattaatcttaaatacctgggc
aataaattgtttggtatgagtggaactgtagactttagcagcgctgttgtctcctggact
cagtttaacaaggtaaataaatattag
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