Ruditapes philippinarum (Manila clam): 132731243
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Entry
132731243 CDS
T09557
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132731243
Ion channels [BR:
rphi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132731243
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
Na_trans_cytopl
GPHH
SpoVAE
Motif
Other DBs
NCBI-GeneID:
132731243
NCBI-ProteinID:
XP_060573367
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MGSTMGDEDDNEFTPFQPFTRDSLFLIERRIAEEKTKEEELTKLAAEDANHDSDDDDEPA
HAEEPLKPNCKLEAGKKIPPTLEDYFLPEHIGKPLEDIDEYYLNKKSFCVIGKDKTIFRF
SATDGFFLLSPFNPLRRFALYILVHPWFSILVMLTILANCVFMTINHTKEVSTMAEYVFT
AIYTVESLVKMTARGFVLQPFTYLRDPWNWLDFGVIAIAYMTMFIEELGNLSALRTFRVL
RALKTVAVVPGLKTIVGALLEAVIRLRDVGILTSFVLSIFALVGMQLYSGRLRNKCVLNT
DYNFTSDEEWLNYTMTPDNWLKLDSGEYLMCGNSSTAGICPGNFTCHEKIGDNPNFGFTS
FDNFGWALLCAFRLMTQDFWENLYMLILRAEGLPHSIYFILVILLGSFYLINLILAIVAM
SYDEQQKSDKADEEALQAEKDNLSNDDSLSSFSTSEPSETKIDNLVEELEEIVDELAAKS
PSNASNASEPPFSPVEDSVDRISLQSEKHFEDQNLLRVATNKASFSLPGSPYSKRRKSRL
SLKIAKSLRQHAERQPLVPVHLEALNLPYADDSNAVTPSSDDIKLCNLPSKFSMLARRAS
MRRAFDDSSRRSSYASVTSRGSHRHSPHSPDKDKLSMLMGAFERNKHHLSPGVCLDKSKL
DENDDSDCELSKRSKASCRTPSASQVDPKDVMVLRELIDHVEVASRRKSGFSGSIFSIEK
EPLKDKVERLLCSWEVPRWFAKIQEWVGFIILDAFVDLFITLCILANTAFMAADQHGMSP
EMGRTLEMGNQVCSYIFAAEAFLKIVALGLMKYLKDGWNCFDFFIVTLSFLEMLLEGVKG
LSVLRTFRLLRVFKLAKSWQTLNMLISIVARTLGALGNLTFVLGIVIFIFAVMGQQLFSQ
NYDKYYIVETQEGLPRWCFKDFLHSFMIVFRVLCGEWIDSMWYCIRANGNVCIPFFLLTY
VIGNLVVLNLFLALLISSFGTENLASDSGEEEAGSPNKLAEAFNRFSRFGNWVKVHLIVL
VKRTKEGKRALPVNVDTNGKNGTMLDGTVIGNGNVCEMTLDENGHVTPTTKPELNGDTVD
AMLSEPSTRTPSRASDRKSLASDSDASSVSDAETQSLKKVELDGDPEINEVDVEFAEYPD
DCFCSVFKRKIKCCRTVEETTIGKFWWEWRCKAYRLTQHKYFETFIITMILTSSLALALE
DIYLSERPTLSLILEYMDKVFTVVFLLEMFLKWFAFGWKFYFTDAWCWLDFVIVAISIIM
VIAKVFNIGDAESLKAMRTLRAFRPLRAVSRWEGMRVVVNALIKAIPSIFNVLVVCIVFW
LIFCIVGVQFFSGKFFKCVDEEGTRLNASIVPNMSECFAQNYTWVNSKINFDNVLNAYLA
LFQVATYKGWIEIIRDSVDSPSEKGDQPQDEQSLVYYLYFVLFIIFGSFFTLNLFIGVII
DNFNKQKKKAGGSLEMFMTEDQKKYYKAMKRMQARSPIKAIPRPNWFPANYLFDLTTSQK
FDILIMIVIMLNMVTMTMEHYDQTATFTDTLYWINFSFIVIFTGECVMKLLALRQYYFKI
PWNVFDFVVVVLSILAETASLALGGYLEEFLVSPTLLRVVRVFRVGRVLRLVKSAKGIRT
LLFSLAVSLPALFNIGLLLFLVLFIYAVFGMNFFKDVHVPYGGLDDVFNFQTFFKSIITL
FQMCTSAGWDGVLNGLMNTEDCNTDTSGGKKNTCGSYPLAVLYLITYLVISFLVVVNMYI
AVILENFSQATEDVQQGLTPEDFDMYYEKWEKYDPDATQYIPLEKLSDFVDYLDEPLQLP
KPNYFLLVKLDIPIYEGDLCFCRDILDALTKNFLGTSDTGDIPAEETHDKKKIEYDVISS
TLLRQKEHYAARIIQKAYRNYRAAHGGFPDPPPYEVAIDIPDTNTENNVNNDRQGNEVIE
MQDISSKDSKESEEKEKEKDKDSNENFDRGDTDHTIVEVDLKPDSDVVA
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcacgatgggagatgaggacgataatgagttcacaccatttcaacctttcacc
cgcgattctcttttccttattgaaaggagaatcgctgaggaaaaaactaaggaggaagag
ttaaccaaattggccgcggaagatgcaaatcacgactccgatgatgacgatgaaccagct
catgcagaagaaccattaaaacccaactgtaaacttgaagccggaaaaaagatacctccc
acattagaagattattttctaccagagcatatcggcaaacctttggaagatatagatgaa
tactacctaaacaaaaagtcattctgcgtaataggaaaagacaagacaatttttagattc
agcgccacagatgggttctttttactcagtccattcaacccccttcgtagattcgcactt
tatattctcgttcatccatggtttagtattttagttatgctcaccattctagctaattgc
gtgttcatgacaattaaccacacaaaggaagtgtccactatggcagagtacgtgttcacc
gcaatttatacagtagaatccttagtaaaaatgacagcgagagggtttgttttgcaaccg
tttacatatctcagagatccatggaattggctggattttggtgtgatagccatagcgtat
atgacaatgtttattgaggaattagggaatctgtcagccctaagaacatttagagtgttg
agagccctcaaaaccgtagcagtagtacctggtcttaaaaccatcgtgggtgccttactg
gaagccgttattagattacgtgacgtcggtattctgacgtcattcgtgttgtcaatattt
gctttagttggtatgcagctgtatagcggcagattaagaaataaatgtgttttaaatact
gactataatttcacaagtgacgaagaatggttaaactacacgatgactccagacaactgg
ctcaaacttgattcgggtgaataccttatgtgtggaaattcatctaccgcgggaatttgt
ccaggtaacttcacatgccatgaaaaaataggagataacccaaactttgggtttacaagt
tttgacaactttggttgggctttactctgtgcctttcgacttatgacccaagacttttgg
gaaaatctctatatgctgattctccgagccgaaggtttgccacacagtatctatttcatc
ctcgtcattttgttagggtcgttttatctaatcaaccttatcttggccattgttgccatg
tcgtacgacgagcaacagaagtcggacaaagcggacgaagaggcactgcaagctgaaaaa
gataatctttcaaatgatgactccctgtcatcatttagcacttcagaaccgagtgagacg
aaaatagacaacttggtggaagaacttgaagagatagtggacgaacttgctgctaagagt
cctagtaatgcatcaaatgcaagcgaacctccgtttagtcctgtagaagacagtgttgat
agaatctcgcttcagtcagagaagcactttgaggaccaaaatcttctaagagttgctaca
aataaggctagtttcagcttgccaggctccccttattccaaaaggcggaaatccagatta
agtctaaaaatagcaaaatcactacgtcaacatgctgagcgacaaccattggttcccgta
catttggaagccctaaatctgccgtatgccgatgattccaatgcagttaccccttcctct
gatgatataaaactatgcaatttaccttcaaaattctcaatgctggcaagaagagcttcc
atgaggagggcttttgatgattcgtctcgtcgtagtagctatgcgtccgtgacaagtagg
ggttcacataggcactcccctcattcgccggacaaagacaaattatcaatgttgatggga
gcatttgagagaaataaacatcatttatctcctggtgtttgcttggataagtcaaaattg
gatgaaaatgatgattccgactgcgagctaagtaaaagatcaaaggcttcatgcagaacg
cctagtgcttcgcaagtagatcctaaagatgttatggtcctgagagagcttattgatcac
gttgaggtcgcatcaagaaggaaaagtggatttagtggaagcatattcagcatagagaag
gaacctttaaaagataaagtagaacgattactgtgtagttgggaggtcccaagatggttt
gcaaaaattcaagagtgggttggatttataattctcgacgcgtttgtggatttatttatc
actctatgcattttagctaatactgctttcatggctgcagatcagcatggtatgtctcca
gaaatgggacgtactctcgaaatgggtaaccaagtgtgttcttatatatttgctgcagaa
gcattcctgaagatcgtagctcttggtttaatgaagtacttaaaagatggttggaactgt
tttgactttttcattgtaacactaagttttttagaaatgttattagaaggcgtgaagggc
ctctcggtcctcaggactttccgtttgctgcgtgtgtttaaacttgcaaagtcatggcag
acgttaaacatgctcatcagtattgtggctagaactttgggagctttaggcaacctaacg
tttgttttaggaatagtcattttcatattcgcagtaatgggacagcagttgttctcccag
aactatgataaatattatattgtggaaacgcaggaaggacttccgaggtggtgttttaaa
gattttttgcattcgtttatgatagtgtttagggtattgtgtggagaatggatagattct
atgtggtattgcataagagctaatggaaatgtgtgcatacctttcttcttgctgacctat
gtgataggaaacttagtggtcctcaatttgtttcttgccttactgatctcctcatttggg
actgagaatttggccagcgattctggcgaggaggaagcgggttcaccaaacaaactggca
gaagcttttaacagattttcaaggtttggaaattgggtgaaggttcacttgattgtatta
gtgaaaagaactaaagaaggtaaacgagcgttaccggtgaatgttgacacgaatgggaag
aacgggacaatgctcgatggcaccgtcattggtaatggcaatgtgtgcgaaatgacgctt
gatgaaaatggtcacgtgactcccactactaaaccagaattgaatggggatacagtggat
gccatgctgtcagaaccatcgacaagaactccgagtcgggcctctgatagaaaaagtttg
gcctcggattccgacgcgtcgtccgtgtcagacgctgaaactcaaagtttgaaaaaagta
gagctggacggtgatccggagataaacgaagtggatgttgagtttgcggaatatcccgat
gactgcttttgtagtgtgtttaaaagaaagatcaaatgttgtcggacagttgaagaaacg
acaataggaaagttctggtgggaatggagatgcaaggcctacagattaactcagcataaa
tactttgaaacattcatcatcacgatgatcttgactagcagtttagctctggcgttagag
gatatttatttgtcagaaaggccaacgctatcgttaattcttgaatacatggacaaagtt
ttcaccgttgtctttcttctagaaatgtttctaaagtggtttgcattcggttggaagttc
tactttacagatgcatggtgttggctcgattttgtgatcgttgctatttcaattattatg
gttattgcaaaggtgtttaatattggagacgccgagtctctgaaagccatgaggacgctg
agagcttttagaccccttagagctgtatcaagatgggagggaatgagagtggttgtgaat
gcgctcatcaaagcgataccatctattttcaatgtactcgttgtgtgtatagttttttgg
ctcatattctgcatagttggggtgcaattcttttctggaaagttctttaaatgtgtggat
gaagagggaactagattaaatgcgtctattgttccgaatatgtctgaatgttttgctcaa
aattatacttgggtaaattccaaaatcaacttcgacaatgtgttaaacgcctatttggct
ttgttccaagtggccacatacaagggttggattgagatcataagggactcggtcgacagt
cctagcgaaaaaggagaccaaccgcaagacgagcagagtttggtgtattatctttacttc
gtgttattcattatatttgggtcgttctttaccctcaatcttttcatcggtgttatcatc
gataattttaacaagcagaagaagaaggcaggtggatcattggaaatgttcatgacagag
gaccagaaaaagtattacaaagcaatgaaaagaatgcaggccagaagtccaataaaggcc
atcccacgtcccaattggttcccagcaaattacttatttgatctgacgacgagtcaaaaa
ttcgacattctcattatgattgtgatcatgctcaatatggtaacgatgactatggagcat
tatgaccaaaccgctacgttcaccgacaccctttactggatcaatttcagcttcatcgtt
atattcactggcgagtgtgtcatgaagctgcttgccctacgacaatactatttcaagatc
ccttggaatgtctttgattttgtagttgtcgttttgtccatattagctgaaactgcaagt
ctagcgcttggaggctatttagaagaatttctagtttctcccaccttacttcgagtcgtt
cgtgtcttccgagttggccgagtgctccgtctggtgaagtcagccaagggaattagaact
ttgcttttttcgctcgctgtttcactgcctgctttgtttaacattggtttactgttgttc
cttgtattatttatttatgctgtatttggaatgaacttttttaaagatgtccatgtacct
tacggtggtctggacgatgtttttaactttcaaacattttttaaaagtataataactctg
tttcaaatgtgcacatccgcgggatgggacggtgttttaaatggtttaatgaacaccgag
gactgtaatacagacactagcggtggcaagaaaaatacatgtggaagttacccattggca
gtgttgtatctaataacgtatctggtgattagtttccttgttgttgttaacatgtatata
gctgtcatcctggagaacttcagtcaggcgactgaggacgtacaacaaggtttaacgcca
gaggactttgatatgtattatgaaaaatgggaaaagtatgaccctgatgcaacacaatat
attccgctggagaaactatctgactttgttgattatttagacgaaccgctgcagcttcca
aaaccaaactactttttgttggtgaaattagatattccaatttacgaaggagatttgtgt
ttttgtcgcgacattctagatgctctgacgaaaaatttccttgggacttcagatacgggt
gacattcctgcggaggaaactcatgataagaaaaagattgaatacgatgtcataagtagc
acgttgctgaggcagaaagaacattatgctgcaagaattatccaaaaggcgtatagaaat
taccgcgcagcacacggaggcttccctgatccaccaccttacgaggttgctattgatatt
cctgatactaatacagagaataatgtaaacaatgatagacaaggaaatgaggtaatagaa
atgcaagatatttcaagtaaagatagcaaggaatctgaagaaaaggagaaagaaaaagac
aaagatagtaatgaaaattttgatagaggtgacactgatcatacaatagttgaagtggat
ttaaaaccagatagtgacgtcgtagcatga
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integrated database retrieval system
