Ruditapes philippinarum (Manila clam): 132742249 Help Entry 132742249         CDS       T09557                                  Name (RefSeq) exosome component 10-like   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03018   RNA degradation Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     132742249  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132742249 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      132742249 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 PMC2NT HRDC Motif Other DBs NCBI-GeneID:  132742249 NCBI-ProteinID:  XP_060586580 LinkDB All DBs Position Unknown AA seq 959 aa AA seqDB search MSDTEACGSEEKTEFLPNCADVNQFVQKTLKSVLQATKCSNEMPAEGDDFDFYSSYQGFQ DIMNIEGKRILHMIQNILKHQNVKVNLGSASGAADIEDKMDMLMDANDQILERVGNWLDE ASGIKKDDNSLVIATATPKQQTSASWNKKSPGASSSTPSFKLLSARNIQRPQMKFKDKVD NRPLPFIPIIKNKPNALKSLEESLQLPEGVTPEMAEKPDFKYPHPYQYELDKLTYVDGQL LPSDIVEPASLDETPCTLINKVEELAGVLDHLKKQTEIAVDLEHHSYRTFQGITCLMQIS TRSQDYLIDTLDLRSELQCLNEVFTDPSIVKVLHGADMDIEWLQRDLGLYVVNMFDTGQA ARVMNLGRFSLAHLLQNYCSITADKQYQLADWRIRPLPEELKKYAREDTHYLLHIYDRMK NELLERGNESKNLLMSVLQRSAKLCTKVYRKPQCTREGYKELYVKNKKVFNSQQLLALSE MFNWRDETARLEDESYGYVLPNHMMLQICDILPREKQGVLACCNPIPPLVRQYLNEIHAI IKKAREAPLHKVELVKHERRPTQHQHPKYNVDSLLHCPHDLSHQDNVIMETDTCLLDSSL VARKSSMFSNTADSVIVVKSHPLLTVFDSKPNTKAALTAVQKIVKEVKAGLTNPYEQYIP VDAKKGSSVIRPAKLPGDKAESIMKSPPWKLLPSSVKRKSIEADGANGSAPPSKRSRTDL HGNSSSVNQHIRFEDGDPNPSTEKTEDDKKALPQDVEIPLRFQVPSKKKKKEKRQDIDII ESVQKHLSHLRELERTNDVALGENPDDQQPFNLAEKIKEKMEQRKLKRKMKKDKKKGKLG DAEPVVDLTMETAENLSVTVNTGNKSRTVNKESDNRTENKGSEEAIVILDDDKEEDKEES KGFKPYDYAEGAKKLLQGNSSKDSDYYDPQFQNRRGKNKGSRSKAYSKRGQKSYSWKQK NT seq 2880 nt NT seq  +upstreamnt  +downstreamnt atgtcggacacagaagcatgcggatcggaagaaaaaacagaatttcttccgaattgtgcg gatgtcaaccagtttgttcaaaaaactctcaagtcagtcctgcaagcaaccaaatgttca aatgagatgccggcggaaggtgacgactttgatttctactcaagttatcagggatttcag gacataatgaacattgaaggcaaaaggatactgcatatgatacagaatatattaaaacat caaaatgtgaaggtcaaccttgggtcagctagtggggcagctgatattgaagacaagatg gacatgttgatggatgccaatgaccaaatacttgagagagtggggaattggttggacgag gcttcaggtataaagaaagatgacaactcattagtcatcgccacggcaactccgaaacaa cagacatctgctagctggaataaaaagagcccaggggcatcatcttctactccgagtttt aaactgttgtctgccaggaatatccaaagaccacagatgaagtttaaagataaagtggac aacagacctttgccttttatccctataataaaaaacaaacccaatgctctcaaatctcta gaagagagtttacagttacctgagggtgttacaccggagatggccgagaaaccagatttc aaatatccacacccgtaccagtatgagttggacaagttaacatacgtggatggtcagttg ctgccatcagatatagtggagccagccagcctagacgagacaccgtgtactttgatcaat aaagtagaggagcttgctggtgttctagatcatctgaagaaacagacagagatagctgta gatctggagcaccatagttacagaacgttccagggtattacgtgtctaatgcagatatca acacgttcacaggattatctcatagatacattagatttacgtagtgaactacagtgtctg aatgaagtgtttacagatccgagtattgttaaagtattacatggtgctgatatggatata gagtggttacaacgtgaccttggtttgtatgttgtgaacatgtttgatacgggacaggca gccagggtgatgaatctaggtcggttttccctagcacatcttctacaaaactactgcagt ataacagctgacaaacagtaccagcttgctgactggagaataaggccgttaccggaagag ctaaaaaaatatgcgagagaagacacacactacctgttacacatatatgacagaatgaaa aatgaactgctggaacgaggcaatgagtccaagaatcttctcatgtctgttcttcaaaga agtgctaagctttgtacaaaggtgtatcgtaagccccagtgtacacgagaaggatacaag gaattatatgtgaagaataagaaagtgtttaactcccaacaactgctggcactaagtgaa atgtttaactggagggatgaaacagccagactggaggatgaaagctatgggtatgtgtta ccaaatcacatgatgttacagatatgtgatatattaccacgtgagaagcagggtgtgtta gcttgttgtaatcctataccccctctagtacgacaataccttaatgagatacatgccatc attaagaaagcaagagaagctccgttacacaaggttgagctggtgaaacatgagaggaga ccaacacaacatcaacatcctaaatataatgttgatagtttgttacattgtccacatgat ctgtcacaccaggataatgtaatcatggaaacagatacctgtctcctagactcgtccctg gtggcaagaaagtcaagtatgttctcaaatacagctgatagtgtgattgttgtcaagtca catcctttattaactgtctttgattcaaaaccaaatactaaagcagccttgactgctgta cagaaaattgtgaaagaagtcaaagctggcttgaccaatccatatgaacagtatattccg gttgatgcaaagaaaggatcttcagtcatcagacctgctaaattaccaggtgataaggct gaaagtataatgaaaagtccaccatggaagttgctgccgtcatcagtaaagaggaagtca atagaggctgatggtgctaatggttcagctccgcccagtaagaggtcacgcacagattta catggtaacagttcctcagtgaaccagcatatcaggtttgaagatggagacccgaaccct agcactgagaaaactgaagatgataagaaggcactgccacaggatgttgaaatacctcta aggtttcaggtgccatcaaagaaaaaaaagaaggagaaaagacaagatatagatattata gaaagtgttcagaaacatttaagccatttgagagagctagaacggaccaatgatgtggct ctaggagaaaatccagacgatcagcaaccttttaatttagcggaaaagataaaggaaaaa atggaacagaggaagttaaaaaggaaaatgaaaaaagacaagaaaaagggaaagctaggt gatgctgaaccagtggttgatttgacaatggaaacagcagaaaatttatctgtaactgtg aatacaggaaataaatctagaacagtgaataaagaaagtgacaacagaactgagaataaa ggaagtgaagaagctatagtgatactagatgatgataaggaagaggataaagaggaaagt aaaggatttaaaccgtatgattatgcagaaggtgctaagaagttattacaaggtaattca tcgaaggattcagattattatgacccacagtttcaaaatagaagaggaaaaaataaggga tcgagaagtaaagcttacagtaaaagaggacagaaaagttactcatggaaacaaaaatag

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