Candidatus Rhodoluna planktonica: A4Z71_06065
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Entry
A4Z71_06065 CDS
T04564
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpla
Candidatus Rhodoluna planktonica
Pathway
rpla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4Z71_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpla03021
]
A4Z71_06065
03400 DNA repair and recombination proteins [BR:
rpla03400
]
A4Z71_06065
Enzymes [BR:
rpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4Z71_06065
Transcription machinery [BR:
rpla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4Z71_06065
DNA repair and recombination proteins [BR:
rpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4Z71_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AOY56511
UniProt:
A0A1D9E0E2
LinkDB
All DBs
Position
complement(1213989..1217618)
Genome browser
AA seq
1209 aa
AA seq
DB search
MAAKNAKTTKNDRLAKRLSFAKNPEPIELPDLLQLQTESFDWLIGAPAWREKEGPAAKTG
LEEIFEEISPIEDSANPSQDAKMGLAFAEPMLYDPSYTPEECKEKGKSYTQPLYIKAEFT
NYLTGEIKSQTVFMGDFPVMTEKGTFVINGTERVVVSQLVRSPGVYFSVSTNTTGNLDVR
NNKAQIIPSRGSYLEFLTEWVRDERKPIARFGQPIVQVQVDRKTKVSATIFLKALGLTED
QIRDEFKDLESAVKAGAPNWTFDINIIENTLAYDRSKVFATPIVTKEDALRELYRKVRGE
AAGAEVSEAWLKSTYFESKRYNLAKVGRHKLNRKLGLSVDANVNTLTVEDVVATLKYLLL
FDLQIANASAVSTGARLEFPIKMGGKNVKIAVSSDDIDDFSNRRIRSVGELIQNQVRIGL
SRMERVVRERMSTQDIEAITPQTLINLRPVVSAIKEFFGASQLSQFMDQNNPLAGLAHKR
RLSALGPGGIARERAQMEVRDVHPSHYGRMCPVETPEGPNIGLIGSLTAYARINAFGFIE
TPYNKVVNGKVSGKIEYLDAAAEQGKAIGAADTPLNADKTFANKKVFARFQGDVVEVDAE
DVDYLDISPRQLASVSTSLIPFLEHDDSSRALMGANMQRQAVPLLRSDSPFVGTGMERVA
AIDSGAVIVNETAGVVTEVNADTITVTQDKGGDKIYVLRKFDRSNQGTAINQRVIVSEGQ
RVEAGEVLADGPSTENGELALGKNLLVAFMPWEGHNFEDAIILSQNLVKDDTLSSIHIEE
YEVDARDTKLGKEEITADLPNVSQEALAQLDERGIIRIGAEVRPGDILVGKVTPKGETEL
SAEERLLRAIFNEKSREVRDTSLKVPHGEQGTVIGVKVFDIEAGDDELGAGVNQRVVVHI
AQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDVVLNPLGIPGRMNFGQVLE
THLGWISKQGWKVEGVAKWADQMVAEMREGAPGTKVATPIFDGASKDEIVGLLKSTLPNR
DGQRLVDETGKATLFDGRSGEPFPEKISVGYMYILKLHHLVDDKIHARSTGPYSMITQQP
LGGKAQFGGQRFGEMEVWALQAYGAAHTLQELLTIKSDDITGRVKTYEAIVKGENIQAPG
IPESFRVLAKEMQSLALNVEVLNEQGQAVALKEEDTFESDRAAEELGINLSRNEASIVDV
EFDQFNNGY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcgaagaacgcaaaaactactaagaacgatcgattggcaaagcgtctttccttt
gcgaaaaaccctgaaccaatcgaattaccagatctgctccagctgcagaccgaaagcttt
gattggctaatcggtgcacctgcttggcgcgaaaaagaaggcccagccgctaagaccggt
ctagaagagatctttgaagaaatctcaccaatcgaagactcagcaaacccttcgcaagat
gccaagatgggccttgcctttgccgagccgatgctttacgacccttcatacacgccagaa
gagtgtaaagaaaagggcaagagctacacccagccgctctacatcaaagccgagttcacc
aactacctaaccggtgaaatcaaatcacagaccgttttcatgggtgacttcccagtcatg
accgaaaaaggcaccttcgttatcaacggaaccgagcgtgttgtagtttcacagctagtt
cgttcacccggtgtctacttctcggtttcgacaaacaccacgggtaacctcgatgtgcgc
aacaacaaggcgcagatcatcccaagccgtggttcatacctagagttcctgaccgagtgg
gttcgcgacgagcgcaagccaatcgcccgcttcggccagccaatcgttcaggttcaggta
gaccgcaagaccaaagtctcggcaaccatcttcctaaaggccctaggtctaaccgaagac
cagattcgcgatgagttcaaagacctcgaatcagcagttaaggcgggagcacctaactgg
actttcgatatcaacatcatcgagaacaccctggcttacgaccgctcaaaggtttttgcc
accccaatcgtcaccaaagaagatgcacttcgcgagctttaccgcaaggttcgtggcgag
gcagccggtgccgaagtttcagaggcttggctaaagtcgacctactttgaatcaaagcgc
tataaccttgccaaggtcggtcgccacaagctaaaccgcaagctcggtctaagcgttgat
gccaacgtcaacaccctcaccgtcgaagacgttgtagctaccctcaagtacctacttttg
ttcgacctacagattgcaaacgcttctgccgtctcaaccggtgctcgtcttgagttccca
atcaagatgggtggcaagaacgtcaagatcgctgtttcatcagacgacatcgacgacttc
tcaaaccgtcgcatccgttcggttggcgagctaattcagaaccaggtgcgcatcggtcta
agccgcatggagcgcgtggttcgtgagcgcatgtcgacccaagacatcgaggcaattact
ccgcagaccctgatcaacctgcgtccagttgtcagcgccatcaaagaattctttggtgct
tcgcagctttcacagttcatggaccaaaacaacccacttgccgggttggcgcacaagcgt
cgtctatcggctcttggtcctggtggtatcgctcgtgagcgtgcccagatggaggttcgt
gacgttcacccatcgcactacggccgtatgtgtccagtagaaacccctgaaggtccaaac
atcggtctaatcggttcgctaaccgcctacgcccgcatcaatgccttcggtttcatcgag
actccttacaacaaggtcgtcaacggcaaggtttcaggcaagatcgagtacctagacgcc
gctgccgagcagggcaaggccatcggtgcagccgacaccccactaaacgccgacaaaacc
tttgccaacaaaaaggttttcgcacgtttccagggtgacgttgttgaggtcgacgcagaa
gacgtcgactacctagacatctcgcctcgtcagttggcttcggtttcaacctcgttgatt
ccgttcctcgagcacgacgactcttctcgtgcgcttatgggtgccaacatgcagcgtcag
gctgttccactgcttcgttctgactcaccatttgtcggaaccggtatggagcgcgttgct
gcaattgactcgggtgcagttattgtcaacgagaccgctggtgttgtaaccgaggtaaac
gccgacaccatcaccgttacccaagacaagggtggcgacaagatttacgtgcttcgcaag
ttcgaccgttcaaaccagggcaccgctatcaaccagcgcgtcatcgtttctgaaggtcag
cgcgttgaggccggcgaagttctagctgatggtccatcaaccgaaaacggtgaattggca
ttaggtaaaaacttgctcgtggcattcatgccttgggaaggtcacaacttcgaagacgcc
atcattcttagccagaacttggtcaaagacgacaccctttcttcgattcacatcgaagag
tacgaggttgacgctcgcgacaccaagctaggtaaagaagaaatcaccgccgacctacca
aacgtttcgcaagaggctttggctcagcttgacgagcgcggcatcatccgcattggtgct
gaggttcgcccaggcgacatcctggtcggaaaagttacccctaagggtgaaaccgagctt
tcagctgaagagcgcttgctacgcgcaatcttcaacgagaagagccgcgaagttcgcgac
acctcgttgaaggtgccacacggcgagcaaggtaccgtcatcggcgttaaggtcttcgac
atcgaagctggcgacgacgagctaggtgccggtgtaaaccaacgcgtagtcgttcacatc
gctcagaagcgcaagattaccgaaggtgacaagcttgctggtcgccacggaaacaagggt
gttatctcgaagatccttccggtcgaagacatgccattccttgaagacggaaccccggtt
gacgtagttctaaacccacttggtattccaggtcgtatgaacttcggtcaggttcttgag
acccaccttggttggatctcaaagcagggttggaaggttgaaggcgttgccaagtgggcc
gaccagatggttgccgagatgcgcgaaggcgcaccgggcaccaaggttgctaccccaatc
ttcgacggcgcttctaaagacgaaatcgtgggtctgctcaagtcgaccctgccaaaccgt
gacggtcagcgtctagttgacgagaccggtaaggcaactctgttcgatggccgttcaggt
gagccgttcccagagaagatttcggtcggttacatgtacatcttgaagctgcaccaccta
gttgacgacaagattcacgctcgttcaaccggtccttactcaatgattacccagcagcca
ttgggtggtaaggctcagttcggtggtcagcgctttggtgagatggaggtgtgggcactg
caagcttatggtgcagcgcacaccctgcaagagttgctcactatcaagtcagacgacatc
accggtcgtgtcaagacctacgaggcaatcgtcaagggcgagaacatccaggctcctggt
atcccagagtcattccgagttctagcgaaagaaatgcagtcactggcactcaacgttgag
gttctcaacgaacagggtcaggcagttgctctgaaagaagaggacaccttcgaatcagac
cgtgctgctgaagagctcggcatcaacctttcgcgcaacgaagcatcaatcgttgacgtt
gaattcgatcaattcaacaacggttactaa
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integrated database retrieval system
