Pararhodospirillum photometricum: RSPPHO_01503
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Entry
RSPPHO_01503 CDS
T01851
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00300
Lysine biosynthesis
rpm00470
D-Amino acid metabolism
rpm01100
Metabolic pathways
rpm01110
Biosynthesis of secondary metabolites
rpm01120
Microbial metabolism in diverse environments
rpm01230
Biosynthesis of amino acids
Module
rpm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSPPHO_01503
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSPPHO_01503
Enzymes [BR:
rpm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RSPPHO_01503
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6424
Motif
Other DBs
NCBI-ProteinID:
CCG08129
UniProt:
H6SJG4
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All DBs
Position
complement(1806010..1807278)
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AA seq
422 aa
AA seq
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MDHFTYKSGILHAEDVPLPRIAESVGTPFYVYSSATLEHHYRVITEAFTGQDAHVCFATK
TNGNKAVLTLLGRLGAGADVVSVGEMRHAIAAGIPAKRVVFSGVGKTRDELTAALSLGIA
QINVESEPELRALSEFASAMGTLAPVALRINPDVTADTHDKISTGRKENKFGIDWATAPA
LFRLANTLPGIDLKGVAVHIGSQILDLAPFRAAFLRLRELVLSLRGEGIALKRVDLGGGL
GVPYHRDDPSSPAPSAYAALAKECFGDLGVTLILEPGRLIAGNAGLLVSRVVYVKEGAAR
KFLILDAGFNDLVRPAMYDAYHEILPVEQPAPDAPYEPLDVVGPICETGDLFARQRPLPP
LAPDALVAFATAGAYGAAMSSTYNGRPLVPEVLVKGNRFDVVRRRPTLAEMTALESVPEW
LK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcacgtacaagtccggcattttgcatgccgaggatgttcccctgccccgc
atcgcggagtcggtgggcacgccgttttatgtgtattccagcgcaaccttggagcatcac
taccgggtgatcaccgaggccttcaccggccaggatgcgcacgtctgcttcgccaccaag
accaacggcaacaaggccgtgctgaccttgttgggccgactgggcgccggcgccgacgtg
gtgagcgtgggcgagatgcgccatgccatcgccgccggcattccggccaagcgggtggtg
ttctccggggtgggcaagacccgcgacgaactgaccgccgccttgtcactggggatcgcc
cagatcaacgtcgagtccgagcccgagctgcgcgccctctcggagttcgcctcggccatg
ggaacgctggcgccggtcgccctgcgcattaatcccgacgtgaccgccgacacccacgac
aagatctccaccgggcgcaaggagaacaagttcggcatcgactgggccacggcgccggcc
ttgttccgcctcgccaacaccttgcccggcattgatctcaagggcgttgcggtgcacatc
ggctcgcagatcctcgatctggcgccgttccgggcggccttcttgcgcctgcgcgagttg
gtgctttcgctgcgcggcgaggggattgccctgaagcgggtggatctgggcggtggcctt
ggggtgccctaccaccgcgacgacccgtcaagcccggcgccgagcgcttatgccgccttg
gccaaggagtgctttggcgacctgggcgtgaccttgatcctggagcccggccgcctgatc
gccggcaacgccggcctgctggtctcgcgcgtggtctatgtgaaggaaggggcggcgcgc
aagttcctgatccttgatgccggcttcaacgatctcgtgcgcccggccatgtacgacgcc
tatcatgagatcctgcccgtcgagcagccggccccggacgccccctacgagccgctggac
gtggtcgggcccatttgtgaaaccggcgacctgttcgcccggcagcggcccctgccgccc
ctggccccggacgccttggtggcctttgccacggcgggcgcttatggcgcggccatgtcc
tccacctacaacggccgccccctggtgcccgaggtgctggtcaagggcaaccgcttcgat
gtcgtgcgccgccgccccaccctggccgagatgaccgccctggaaagcgtccccgagtgg
ctcaaataa
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