KEGG   Agrobacterium pusense CFBP5875: CFBP5875_07255
Entry
CFBP5875_07255    CDS       T06598                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rpus  Agrobacterium pusense CFBP5875
Pathway
rpus00230  Purine metabolism
rpus00240  Pyrimidine metabolism
rpus01100  Metabolic pathways
rpus01232  Nucleotide metabolism
Module
rpus_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rpus_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rpus00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    CFBP5875_07255
   00240 Pyrimidine metabolism
    CFBP5875_07255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpus03400]
    CFBP5875_07255
Enzymes [BR:rpus01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     CFBP5875_07255
DNA repair and recombination proteins [BR:rpus03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    CFBP5875_07255
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Acetyltransf_11 Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QCL84373
LinkDB
Position
circular:1434318..1438136
AA seq 1272 aa
MRIERRFTKPGQSPYAEIDFRKAVSEIKNPDGSIVFRLADIDVPAQFSQVATDVLAQKYF
RKAGVPKFLKKVEENDVPSFLWRSVPDEKALKDVPEAERYGSETDARQVFDRLAGTWAYW
GWKGKYFSSEEDALAFRDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG
EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE
EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENY
VKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGDWNLT
ARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAAGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDQATKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAELSY
EYRTLGLGYANIGGLLMSSGIPYDSAEGRAIAGALTAIMTGVSYATSAEMAGELGPFPGF
APNRENMLRVIRNHRRAALGQLEGYEGLSVNPVALVHGDCPDQDLIAHATAAWDKALELG
EKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDALR
SLGYSESQIAEIEAYAVGHGNLNQAPGINPSTLKAKGFTDEKIEAVNGALKSAFDIKFVF
NQWTLGADFLKETLKVSDEQLSDMSFNLLEHLGFGKKDIEAANVHVCGAMTLEGAPFLKN
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYM
LSWKLALKANALYRDGSKLSQPLNASLVEDEDDEDLIEDLIQQPAAQQAVTITEKIVERV
IERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLVSTGWTRGYKPTIVSRNDGERTASEPKGSATA
APARASANVTSFAGSAARKLEPTVAIATSEIVSFKRDYEERAKELAEEIAEEVIDEVVQE
AQQTATALFSDKAAADAASAKTEAKKVENERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGATSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgcattgaacgccgcttcacgaagcccggccaatcgccttatgcggagatcgacttc
cgcaaggccgtcagtgaaatcaagaacccggatggatccatcgtgttccgtctggctgac
atcgacgttcccgcgcagttcagccaggttgccaccgacgttctggcgcagaaatatttc
cgcaaggccggcgtgccgaagttcctgaagaaggttgaggaaaatgacgttccttccttc
ctctggcgctccgtgcccgatgaaaaggctctgaaggatgttccggaagccgagcgctac
ggctccgagaccgatgcacgccaggttttcgatcgcctggccggcacctgggcctattgg
ggctggaagggcaaatatttctcgtccgaagaagatgccctcgccttccgcgacgagctt
gcctatatgctcgccacccagcgtgttgcccccaactccccgcaatggttcaacaccggc
ctgcactgggcctatggcattgatggtcccggccagggccacttttatgtcgaccccttc
accggcaagctgaccaagtccaagtccgcttacgaacatccgcagccgcatgcctgcttc
atccagtccgttgaggacgacctcgttaatgaaggcggcatcatggatctgtgggtgcgt
gaagcgcgcctgttcaaatacggctccggcactggctccaacttctcctatctgcgtggc
gaaggcgaaaaactctccggcggcggcaaatcgtcaggcctgatgagcttcctcaagatc
ggtgaccgcgcagccggcgccatcaagtccggcggcacgacccgccgcgcagcgaagatg
gtcgtcgttgatgccgaccaccccgatatcgaagcctatatcgactggaaggtgaacgag
gagcagaaggttgccgctctcgtcaccggttccaagatcgtcgccaagcacctgaaggcg
atcatgaaggcctgcgtcaactgcgaagctgacaacggcgattgcttcgacccggccaag
aaccctgccctgaagcgcgaaatccgcgccgccaagaaggacatggtgccggaaaactac
gtcaagcgcgtcatccagttcgccgagcagggttacaaggacatccagttcaagacctat
gacacggactgggattcggaagcctacctcacggtgtcgggccagaactccaacaactcc
gtctcgctgaaggacgatttcctgcgcgctgtcgaaaatgacggtgactggaacctcacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcccgcgacctctgggaaaagatt
tcccacgccgcctgggcgtctgccgatccgggtctgcacttcaacacgacgatgaacgac
tggcacacctcgccggcggccggcccgatccgcgcctccaacccgtgctcggaatacatg
ttcctcgatgacacggcctgcaaccttgcctcgctgaaccttctgcagttcaaggatcag
gcgacgaagcgcatcgatatcgccgattacgaacacgccgttcgcctctggaccgtcgtg
ctcgaagtgtccgtcatgatggcgcagttcccgtcgcgccagatcgccgaactctcctat
gagtaccgcacgctgggcctcggttacgccaatatcggcggcctcctgatgtcctccggc
attccctatgacagcgccgaaggccgcgccattgccggtgcgctcaccgccatcatgacc
ggcgtgtcctatgccacctcggccgaaatggccggcgagcttggccccttcccgggcttt
gcgcccaaccgcgaaaacatgctgcgcgtcatccgcaaccaccgccgcgccgcccttggc
cagttggaaggttatgagggcctgtcggtcaacccggtcgcactcgtccatggcgactgc
ccggatcaggacctgatcgcccacgcaacggccgcctgggacaaggcgctggaacttggc
gaaaagcacggctaccgcaacgcccagaccaccgttatcgcacccacaggcacgatcggc
ctcgtgatggattgcgacacgaccggtatcgagcccgatttcgcgctggtgaagttcaag
aagctcgccggtggcggttacttcaagatcatcaaccgcgccgttccggatgcgctgcgt
tcgctcggttactccgaaagccagatcgccgagatcgaggcctatgccgtcggccatggc
aatctcaaccaggctcccggcatcaacccctcgacgctgaaggccaagggcttcaccgat
gagaagatcgaggccgtcaacggcgcgctgaaaagcgccttcgacatcaagttcgtcttc
aaccagtggacgctcggcgccgacttcctcaaggaaacgctgaaggtttccgacgagcag
ctctccgacatgagcttcaacctgctcgagcacctcggcttcggcaagaaggacatcgaa
gcggccaacgttcacgtctgcggcgcgatgacgctggaaggcgcaccgttcctgaagaac
gagcatctgcccgtcttcgattgcgccaacccctgcggcaagatcggcaagcgttacctc
tccgtcgaatcgcatatccgcatgatggcggcggcacagcccttcatctcgggcgcgatc
tccaagacgatcaacatgccgaacgatgcgacggttgaggattgcggcgcagcctacatg
ctctcctggaagctggcgctgaaggccaacgccctttaccgtgatggttccaagctttcc
cagccgctcaatgcgtcgctggtggaagacgaggacgacgaagacctgatcgaagacctg
atccagcagcccgccgcacagcaggccgtgacgatcaccgaaaagatcgtcgaacgcgtc
atcgagcgtgtctcacgcgagcgtgaaaagctgccgaaccgccgtcagggttacacccag
aaggcaactgtgggcggtcacaaggtctatctgcgcaccggtgaattcggtgatggccgc
atcggcgaaatcttcatcgacatgcacaaggaaggcgctgccttccgcgcaatgatgaac
aactttgccatcgccatttcgctcggcctgcaatatggcgtgccgctggaagaatatgtg
gaggccttcaccttcaccaagttcgaaccggccggcatggtgcagggcaacgacgcgatc
aagaacgccacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgccacgatctcgcccatgtcgatacgtccgacttctccaacacggcgctcggcaagggt
atccaggaaggcaagaccaacctcgtttccaccggctggacccgcggttacaagccgacc
atcgtgtctcgcaatgacggcgaacgcaccgcttccgagcccaagggttcggcaacggca
gcccctgcccgcgcctcggccaacgtgacctcgtttgcaggctctgccgcccgcaagctg
gaaccgacagtcgccatcgcaacctccgaaatcgtctccttcaagcgggactatgaagag
cgcgccaaggaactggccgaagaaatcgccgaagaagtgatcgacgaggtcgtccaggaa
gcccagcagacggcaaccgccctcttctccgataaggccgccgcagacgccgcttcggcc
aagacggaagccaagaaggtcgaaaacgaacgccgcatgcgctcgatcgctcaggggtat
acgggcaacatgtgctcggaatgccagaacttcacgatggtgcggaacggcacttgcgag
aagtgcgatacttgtggtgcgacgagcggttgcagctga

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