Rickettsia prowazekii Chernikova: M9W_00925
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Entry
M9W_00925 CDS
T01789
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rpw
Rickettsia prowazekii Chernikova
Pathway
rpw03030
DNA replication
rpw03430
Mismatch repair
rpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9W_00925 (holA)
03430 Mismatch repair
M9W_00925 (holA)
03440 Homologous recombination
M9W_00925 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpw03032
]
M9W_00925 (holA)
03400 DNA repair and recombination proteins [BR:
rpw03400
]
M9W_00925 (holA)
Enzymes [BR:
rpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9W_00925 (holA)
DNA replication proteins [BR:
rpw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9W_00925 (holA)
DNA repair and recombination proteins [BR:
rpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9W_00925 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AFE49010
LinkDB
All DBs
Position
225934..226899
Genome browser
AA seq
321 aa
AA seq
DB search
MQFYFSQIGRLFELIAAGKIRALLLYGPDKGYIEKICTYLIKNLNMLQSSIEYEDLNILS
LDILLNSPNFFGQKELIKVRSIGNSLDKNLKTILSSDYINFPVFIGEDMNSSGSVKKFFE
TEEYLAVVACYHDDEAKIERIILGKLAKTNKVISKEAITYLKTHLKGDHALICSEINKLI
FFAHDVHEITLNHVLEVISSEITANGSNLAIYFSKKDYSNFLQELDILKKQNINEVLIIR
ALIRHYLNLYIVLSKVKNGECLEIAIKSLSPPIFYHNINDFTKIVHALSLTECIKTLKLL
QQAEVDYKLNPASFDLFQSIL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttatttttcgcaaataggtagattatttgaattaatagcagccgggaagatt
agggctcttttactatatggtcctgataaaggctatatagaaaagatttgtacatattta
atcaaaaacttgaatatgctacaatcttctatagaatatgaagatcttaatattttatct
ttagatatattacttaattcacctaatttttttggtcaaaaagaattaattaaagtgaga
tcaattggaaattcactcgataagaatttaaaaacaattctaagcagtgattatataaat
ttccctgtatttataggggaagatatgaattctagtgggagtgttaaaaagttttttgaa
acagaagaatatttagcggtagttgcttgttatcatgacgatgaagcaaaaattgaacga
attattttaggtaaattagcaaaaactaataaagttataagtaaagaagctatcacttac
ttaaaaactcatttaaaaggtgatcatgctttaatttgtagcgaaatcaataaattgata
ttttttgctcatgatgtacatgaaattactttaaaccatgttttagaagttataagtagt
gaaattacagcaaatggtagtaatttggcaatatatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatattttaaaaaaacaaaatattaatgaagttttaattattaga
gctttaataaggcattatttaaatttatatatagttttatcgaaagtaaaaaatggtgaa
tgtttggaaattgcaataaaatcattatcaccgccgattttctatcataatattaatgat
tttacaaagatagtacatgctctcagcctaactgaatgtataaagactttgaaactacta
caacaggcagaagtggattataagttaaatcctgctagtttcgatttatttcaaagtata
ctctaa
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