Rhodopseudomonas palustris DX-1: Rpdx1_1168
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Entry
Rpdx1_1168 CDS
T01381
Name
(GenBank) Extradiol ring-cleavage dioxygenase LigAB LigA subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00362
Benzoate degradation
rpx00627
Aminobenzoate degradation
rpx01100
Metabolic pathways
rpx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpdx1_1168
00627 Aminobenzoate degradation
Rpdx1_1168
00624 Polycyclic aromatic hydrocarbon degradation
Rpdx1_1168
Enzymes [BR:
rpx01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rpdx1_1168
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
ADU42794
UniProt:
E6VDF9
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All DBs
Position
1247149..1247523
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AA seq
124 aa
AA seq
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MSQAVAAGAGRAKREIFGTPIFGPEAAQKGYALNKMCFSFNDAANRAAFVRDEAAYCARY
GLTAAQTDALLKRDLLKLLDEGGNAYYLAKFAGILGLNMQDIGALQTGMTVEQFKAKLLA
ARDN
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggcagtggcggctggcgccgggcgcgccaagcgcgagatcttcgggacgccg
atcttcgggcctgaagccgcacagaagggctacgccctcaacaagatgtgcttctccttc
aacgacgccgccaaccgcgccgctttcgtgcgcgacgaggccgcttattgcgcgcgctac
ggcctcaccgcggcgcagaccgatgcgctgctcaagcgcgatctgctcaagctgctcgac
gagggcggcaacgcctactacctcgccaaattcgccggcatcctcggcctcaacatgcag
gatatcggcgcgctgcagaccggcatgacggtcgagcagttcaaggcaaagctgctggcg
gcgcgggacaactga
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