Rhodococcus qingshengii: C1M55_15805
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Entry
C1M55_15805 CDS
T05315
Symbol
pafA
Name
(GenBank) Pup--protein ligase 2
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rqi03051
]
C1M55_15805 (pafA)
Enzymes [BR:
rqi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
C1M55_15805 (pafA)
Proteasome [BR:
rqi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
C1M55_15805 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AUS35381
UniProt:
A0A069JJY0
LinkDB
All DBs
Position
1:complement(3388767..3390110)
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLIQLVNHDRAGERVLEELLIDAEARLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAETTTMLKVGSAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDVTGKKPVRLAGGRQASALDIQREYHAKAVEHLRNREPDPQVEQVVDL
WGRTLDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRHGFDLSDPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVKRVTEDETIDDAVENPPQTTRAKLRGDFITAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgagacggaattcggcgttacctgcacctttcacgggcacaggagactgagc
cccgacgaggttgctcgttacctcttccgtcgtgtcgtgtcgtggggtcgcagctccaac
gtcttcctccgtaacggagctcgcttgtacctggatgtgggttcgcacccggagtacgcg
acggccgagtgcgacagcctcatccagctggtcaatcacgaccgtgccggtgagcgtgtg
ctcgaagaactgctgatcgacgccgaggcgagactcgccgaggagggtattggtggcgac
atctatcttttcaagaacaacaccgactcggccggaaactcgtacggctgccacgagaac
tttctcgtcgcgcgcgccggtgagttctcccgcatttcggatgtcttgttgccgttcctc
gtcacgcgccagttgatctgcggcgccggaaaggtactgcagactccgaaggcagcgacg
ttctgcctctcgcagcgcgcggaacacatctgggagggcgtctcgtcggctaccactcgc
tcgcgtccgatcatcaacacccgcgacgaaccgcatgccgacgccgagaagtaccgccgc
ctgcacgtgatcgtcggcgattcgaacatggccgaaacgacgacgatgctcaaggtcggt
tctgccgcactggtgctcgagatgatcgaagccggggtgtcgttccgcgatttcgcgctg
gacaacccgattcgtgccatccgcgaggtcagtcacgacgtgaccggtaaaaagccggtt
cgccttgctggtggacgtcaggccagtgccctcgatattcaacgcgaataccacgccaag
gcagtcgaacatctgcgtaaccgcgaaccggacccgcaggtggagcaggtagtcgacctg
tggggtcgcaccctcgacgccgtcgaagctcaggattttgcgaaggtcgacacggagatc
gactgggtcatcaagcgcaagctgttccagcgctaccaggaccgtcacggtttcgatctg
tccgatcccaagatcgcgcagctcgacttggcttaccacgacatcaaacgcggccggggc
gtcttcgacgttctccagcgcaagggcttggtcaagcgggtcaccgaggacgaaacgatc
gacgacgccgtcgagaatccgccgcagaccacgcgcgccaaattgcggggcgacttcatc
accgcagcccaggcagcaggccgggacttcacagtcgactgggttcacctcaagctcaac
gatcaggcgcagagaacggtgctgtgcaaggacccgttccgctccgtcgacgagcgtgtc
gagcgtttgatcgcttcgatgtag
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