Rhizobium ruizarguesonis: J3P73_17560
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Entry
J3P73_17560 CDS
T07270
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J3P73_17560 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrg03019
]
J3P73_17560 (recQ)
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_17560 (recQ)
Enzymes [BR:
rrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J3P73_17560 (recQ)
Messenger RNA biogenesis [BR:
rrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J3P73_17560 (recQ)
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J3P73_17560 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
ResIII
AAA_30
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QSY99638
LinkDB
All DBs
Position
complement(3532054..3533922)
Genome browser
AA seq
622 aa
AA seq
DB search
MSLTERNEPGFSASGALFSSGRSPLDILKQVYGYSSFRGKQQQVVEHVVSGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALSAGQLDLLYVTPERILTDGFRELIANEKIALFAIDEAHCVSQWGHDFRPEYRELGRLG
EQYPGVPRVALTATADPHTRDDMIERLGLDSAEIFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGDSGIVYCLSRAKVEDTAEWLNGQGIRARAYHAGMDRAVRDANQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRG
RMIDEGSAAAEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAVYRTGERFGAGHVVDVLLGNVNEKTERFGHAEMPVFGAGKDIPARV
WQSVFRQLLAMGLIRVDHEAFGALKLEPEARAVFKHERQVFFRKDRPASERRTKKAERSE
RKSGLSGADGGLFEALRAERMAIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLAISGV
GQAKLERYGDAFLEIILAQDNG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgactgaacgcaatgaaccgggcttttccgcttccggcgcgctgttttcttcc
ggccgctcgccgctcgatatcctcaagcaagtctacggctattcctccttccgcggcaag
cagcagcaggtcgtcgagcatgtggtttccggcggcgatgcggtcgtgctctttcccacg
ggcgccggcaagtcgctgtgcttccagatcccggcgctctgccgcgacggtgtcggtatc
gtcgtttcgccgctgattgcgctgatgcgagatcaggtggaggcgatgaagcagctcggc
atccgcgccgcagcactcaattcgtcgctgtcgcgcgaggagttcgtcgaggttcgccgc
gcgctttcggcgggccagctcgatcttctctacgtgacgcccgagcgtattctgaccgat
ggtttccgcgagttgatcgccaacgagaagatcgcgctgtttgcgattgacgaggcccat
tgcgtctcgcaatggggtcatgatttccggccggaatatcgcgaactcggccggctcggc
gagcaatatcccggtgttcccagagtggcgctgacggcgacggccgatccgcatacgcgc
gacgacatgatcgagcggctgggtttggattctgctgagatcttcacgaccagcttcgac
cgaccgaacattgcctacgagatcgtcgagcgcgaccagccgcgccagcagttgctgcgg
ttcctgtccggccacaaaggcgacagcggcatcgtctattgcctgtcgcgcgccaaggtc
gaggatacggccgagtggctgaacgggcagggcattcgcgcgcgtgcctatcatgccggc
atggacagggcggttcgtgacgccaaccaggatgccttcctgaaagaagagaatctttgc
ctggtcgccaccgtcgccttcggcatgggcatcgacaaacccaacgtgcgttatgttgcc
catctcgacctgccgggctcggtagaagcctattatcaggagactgggcgcgccggccgc
gacggcctgccgtccgaagtctggatggcctatggcatggccgacgtcatccagcgcggc
cggatgatcgacgagggcagtgccgccgcggagatcaaacgggtcgaacgcgccaagctc
aatgcgttgctggcgatctgcgagaccgcctcctgccgccgccaggcaattcttgcccat
ttcggcgaagcgcatgccggacaatgcggcaattgcgacacctgcctgaagccggtagag
acctgggagggcacggaagcggcgatcaaggcgctggcggccgtctaccgcaccggcgag
cgtttcggcgctggccatgtcgtcgacgtgctcctcggcaatgtcaacgaaaagaccgaa
cgtttcggccatgccgaaatgccggtcttcggcgccggcaaggatattccggcgcgcgtc
tggcagtcggtcttccgccagctgctcgccatggggttgatccgcgtcgaccacgaggct
ttcggggcgctgaagctggagccggaggcgcgtgccgtcttcaagcacgagcggcaagtg
ttcttccgcaaggaccgcccggcctcggaacggcgcacgaagaaggcagagcgcagcgaa
cgcaaatcgggactatcaggcgccgacggcggtcttttcgaggcgctgcgggccgagcgc
atggcgatcgccaaatcgctcggcgtgccgccctatgtcgtctttcccgatacgacgctg
atcgccttcgccacggagcggcctcgcagccgcaaggaattgctcgccatatcaggcgtc
gggcaggcgaagcttgagcgctacggcgatgccttcctggagatcatcctggcgcaggac
aacggttaa
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