Roseovarius rhodophyticola: RZS32_011350
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Entry
RZS32_011350 CDS
T10617
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RZS32_011350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrl03021
]
RZS32_011350
03400 DNA repair and recombination proteins [BR:
rrl03400
]
RZS32_011350
Enzymes [BR:
rrl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RZS32_011350
Transcription machinery [BR:
rrl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RZS32_011350
DNA repair and recombination proteins [BR:
rrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RZS32_011350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
WYK17019
UniProt:
A0ABZ2TCQ2
LinkDB
All DBs
Position
2240590..2241606
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPLRQAIVVAEPLERGFGLTMGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMDVEGPKRLSVSAKGPGVVTAAEISD
SAGIEILNKDHVICHLDDGADLFMELTVNTGKGYVAADKNKPEDAPIGLIAIDAIYSPVT
KVSYDVQPTREGQVLDYDKLTMKLETDGSITPEDAVAFAARILQDQLSIFVNFEEPESAS
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaactgggccgaactgatcaaaccgacacagcttgatgtgaagccgggc
aatgacccgctgcgtcaggcgattgttgtggccgaaccgcttgagcgtggctttggtctg
acaatggggaacgcgctgcggcgtgtgcttttgtcgtctctgcaaggcgcggccattaca
tcggtgcaaatcgataacgtgctgcatgagttctcaagcgtggccggtgtgcgtgaagac
gtcaccgacatcgttctgaacctcaagggcgtggcgcttcgcatggacgtcgaagggccc
aagcgtttgtcggtctctgccaaggggccgggtgttgtgaccgctgctgagatttcggat
agcgcaggcattgagatcctgaacaaagatcacgtgatttgccaccttgatgatggtgcg
gatctgtttatggagctgaccgtcaacaccggcaaaggctatgtcgcggccgacaagaac
aagccggaagacgcgccgattggcctgatcgcgattgacgcgatttattcgcctgtcacc
aaagtgagctatgacgttcagcctacacgggaaggtcaggttctggattacgacaagctg
accatgaagctcgaaacagatggctcgatcacgccggaagacgcggtggcctttgccgca
cgtattctgcaggatcagctcagcatcttcgtgaacttcgaagagcctgagagcgccagc
cgtcaggacgaggatgacgggcttgagttcaatccgcttctgctcaagaaagtggacgaa
ctggagctgtctgtacgttcggctaactgcttgaaaaatgacaatattgtctacattgga
gatttgatccagaagacagaagccgaaatgctgcggacaccgaactttggacgcaagtcg
ctcaatgagatcaaggaagtgttgtcaggcatgggtctgcatcttggcatggatgtcgaa
gattggccgccggacaacatcgaggatctggcgaagaaattcgaagatcagttttaa
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