Rickettsia rickettsii Hino: RPJ_03125
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Entry
RPJ_03125 CDS
T01738
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rrn
Rickettsia rickettsii Hino
Pathway
rrn00470
D-Amino acid metabolism
rrn00550
Peptidoglycan biosynthesis
rrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPJ_03125 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPJ_03125 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrn01011
]
RPJ_03125 (murD)
Enzymes [BR:
rrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RPJ_03125 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rrn01011
]
Precursor biosynthesis
Amino acid ligase
RPJ_03125 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFB27547
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Position
555873..557375
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AA seq
500 aa
AA seq
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MNSHTKQKIGVFGLGKTGISVYEELQNKYDVIVYDDLKANRDIFEELYSKTAIAALSDSR
WQNLDTIVLSPGIPLTHEIVNIAKSFNIPITSDIDLLFAKSKNLKFIAITGTNGKSTTTA
LISHILNSSGLDYPVAGNIGVSALQAKASKDGYVLELSSFQLDLVKTFTAKIAVLLNITP
DHLDRHQDMPCYIAAKSKIFDRMDQESYAVINIDNDYCREVFIKLQQEQRIKLIPFSVTQ
ILENGISVVDDKISANFFDDISFELQHNSESFRQDEFQGEPAEPECIKIREHRQNLHNSL
VSSFMHYTVPFNKNLQGVHNCENIAASYAVAKIIGVEPKKILESISSFQSLPHRMQYIGS
INNISFYNDSKATNAISAVQSIKALDNIYWLAGGIPKEGGIEEIKPYFSQIKKAYFYGQA
KEIFANTAKHIVDFVICDNLEQAFDLAYKDAVGDNAEVKNILLAPSCSSYDQFKNFEERG
ELFIKLCSILSLRGLTTGSS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcatacaaaacaaaaaataggtgtttttgggcttggtaaaaccggtatatcg
gtttacgaggaattgcaaaataaatatgatgtaattgtttatgatgatttaaaagcaaat
agagatatatttgaagaattatatagtaaaaccgctatcgctgctttatctgattcaaga
tggcaaaatttagatacaattgtcttaagtcctggaattcctttaacgcatgagatagtc
aatattgcaaaaagttttaatattccaatcacttccgatatagacttattatttgcaaaa
tcaaaaaacttaaaatttatagctataaccggtacaaacggtaaaagtactactactgct
ttaataagccatatcttaaatagtagcggtttagactatccggttgccggtaatattgga
gtttctgctttgcaagctaaagcaagtaaggatggatatgtacttgaattgtcttctttt
cagctagatctagtaaaaacctttacagctaaaatagccgtgcttcttaatatcactccc
gaccatttagatagacatcaggatatgccctgctatattgcagcaaaatctaagatcttt
gatcgaatggatcaagagagttatgcggtaattaatatcgataatgattattgtcgtgaa
gtctttataaaattgcagcaagagcagcgtataaagctaattcctttttcggttactcaa
attcttgaaaacggtatttcggtagttgatgataaaattagcgctaatttttttgatgat
ataagttttgaattacagcataattcagaaagttttagacaagatgaatttcaaggtgag
cctgcggagccggagtgtataaaaatacgtgagcacaggcaaaacctgcacaattcgctt
gtatcaagctttatgcattatactgtaccttttaataaaaacctgcaaggagttcataat
tgtgagaatattgcagcaagttatgcagtagctaaaataataggagtagaacctaaaaaa
atacttgaatctataagtagttttcaaagtttacctcatagaatgcaatatatcggtagt
ataaataatataagtttttacaatgatagtaaagcgaccaatgccatatctgctgtgcaa
tcaattaaagcactcgataatatttactggcttgcgggaggaatccctaaagagggtggt
attgaggaaataaagccttatttcagtcaaattaagaaagcttatttttatggtcaagct
aaagaaatatttgcaaatactgctaagcatatagtagattttgtaatatgtgataatctt
gagcaggctttcgatcttgcttataaggatgcagtaggtgataacgcggaggtaaaaaat
atcttgttagcacctagttgtagctcatatgatcagtttaaaaattttgaagagcgtggc
gagttgtttataaaattgtgtagtatcctgtcactccgtggcttgaccacagggtctagt
taa
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