Rickettsia rickettsii Hlp#2: RPK_03215
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Entry
RPK_03215 CDS
T01739
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rrp
Rickettsia rickettsii Hlp#2
Pathway
rrp03030
DNA replication
rrp03430
Mismatch repair
rrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPK_03215
03430 Mismatch repair
RPK_03215
03440 Homologous recombination
RPK_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrp03032
]
RPK_03215
03400 DNA repair and recombination proteins [BR:
rrp03400
]
RPK_03215
Enzymes [BR:
rrp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPK_03215
DNA replication proteins [BR:
rrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPK_03215
DNA repair and recombination proteins [BR:
rrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPK_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AFB28890
LinkDB
All DBs
Position
complement(554726..555865)
Genome browser
AA seq
379 aa
AA seq
DB search
MLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAV
QVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMD
SINPGASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSIS
WVTLEKQIKNCGVILPQKSAEEILKIVKDPKNINEDIEILLNSNKIKFICNENTIMLSKL
IDGTFPDYSAFIPESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVG
EARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPV
LIKFPENPKDIFVVMPVKV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattaatagttgaaacaaaaacattagttcagtccctagggtttgcaagttcc
gttgttgaaaaacgtaatgtcatacctgaatatgcaaacattaaattatcggcacaagac
ggcaatctagagcttagttctactaatatggatttgtacttaagtcaaaaaatagcagta
caggtagtaagtgaaggtgaatgtaccgtttctacgaaaactctaaatgatatagtccga
aaacttccggattccgagcttacattaacagatctcggtacaacgggacttgagatcaaa
ggaaaaaattgtaaatttaatttatttactttgccggttagttcttttcctgcaatggat
agtattaatcctggagcaagttttaaaatttcctgcacggattttgctaaaataatcgaa
tcgacaaaattttcgatttctttagatgaaactcgttataatttaaacggtgtttattta
cacataaaagacaaagagttttgttcggcaagtaccgatgggcatagactttcgatttca
tgggtaacattagaaaaacaaataaagaattgtggagttatattaccccaaaaaagtgca
gaggaaattttaaaaatcgttaaagatcctaaaaatataaatgaagatatagaaatttta
ttaaatagcaataagattaaatttatatgtaacgaaaatactattatgttatcaaagctt
atagacggtactttccctgattatagtgcttttattccggaaagcagcagctcaaaatta
gtaattaatcgaaaaatgtttgcagatagtatagaaaggatagcgataataaccgttgaa
aaatttagagcagtaaaattatcgttatctcgtgaaaccttagagattagtgctgtcggt
gaagcaagaggcaacgcaaaagaggttattaattcttcacaagataaggaaagtttttat
gaatataatagtgatgagtctttagctataggctttaacccgcaatatttggaagatgtc
ttaaaagcagtgaaatcggatttagtagaactatatttttcagatgtttcagcaccggta
cttattaaatttcctgagaatcctaaagatatttttgtcgtcatgcctgttaaggtgtaa
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