Roseiflexus sp. RS-1: RoseRS_2714
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Entry
RoseRS_2714 CDS
T00542
Name
(GenBank) beta-galactosidase. Glycosyl Hydrolase family 2
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00052
Galactose metabolism
rrs00511
Other glycan degradation
rrs00600
Sphingolipid metabolism
rrs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RoseRS_2714
09103 Lipid metabolism
00600 Sphingolipid metabolism
RoseRS_2714
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RoseRS_2714
Enzymes [BR:
rrs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RoseRS_2714
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
ABQ91087
UniProt:
A5UWT4
LinkDB
All DBs
Position
complement(3371823..3374885)
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AA seq
1020 aa
AA seq
DB search
MPELTALNTLPPHALTIPFPAHGPIDADPLASPWRQSLNGVWEFLLLPRPDHVTGAALAG
GDWKPIQVPGNWTMQGFGTPHYTNVQMPFPQMPPSVPDDNPTGVYRRRFTLAPDWRGRRI
VLHIAGCEGACYVYLNDQPVGFHKDSRTPAEYDVTGVVRFDAPNELIAVVLRWSDASFIE
DQDHWWQSGIHRDVFLYATDTVYLADLSVRADVSDDLQEGILRVRCTLDAIGEAGEHTRV
EAQLYDAHGTQMFAEPLGATYTQTHPRFGVRRFVRPELLLEGHVPSPHLWSAETPYLYTF
VVTVYGPAGPERSACRVGFRSIAIRHRQLLVNGRAITIKGVNRHDHSDTTGKAVSRELME
LDIQRMKQFNINAVRASHYPNDPYWLDLCDRYGLYVIDEANIEAHAFYFDLCRDARYTRA
FVERVRNMIERDKNHPSIILWSLGNESGYGPNHDAAAGLARRLDPSRPLHYEGAISRWMG
ESWHGGRTVTDVICPMYASIEEIVAWAEQETDDPRPLILCEYSHAMGNSNGSLADYWEAF
ERYPALQGGFIWEWVDHGIRATDAQGRVYWAYGGDFGDVPNDANFVCDGLVWPDRTPHPA
LYEYKYLIQPVRVELVDPSGTMLRIVNRHDFASIDWLDGVWEVIADGVPVASGRLPELHA
APGEAQVVKLDLDAAHGAGERFLTVRFYQREATLWAPPGHEVAWQQLPLPTVAAMPEPVI
AGESVVVEQRPDRITLRAGATHAVFDVRSGTLASFGRDEQNLIVRGPLLNVWRAATDNDG
LKLRDEPEKPLARWKALGLHRLHHRLNHIRVVAVDNGAASVEIEHAATGRDRWGDFIHIH
RYTLHADGELSVENTVIIGNAISDLPRVGVCMLLTPGLEHLEWYGRGPWDNYSDRKASAL
MGRWRSTVTDQYVPYIMPQEHGHKTDVRFLLLTDQDRRGLFIGGQPTFEFSALHHSDDDL
FRALHTIDLTPRAEVFLNLDAAHRGLGTLSCGPDTLEQHRLMDSVYRFGYRMRAVSSDVG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaacggcgctcaatacgctgccgccgcatgctctgaccattccttttcca
gcccacggtccgattgatgccgatccactggcgtcgccgtggcgccagagtctgaacggc
gtctgggagttcctgctcttgccgcgccccgaccatgtgacgggtgcagcgctggcaggc
ggcgattggaagccgatccaggttcccggcaactggacaatgcaggggttcggaacgccg
cactataccaacgtgcagatgccctttccccagatgccgccatcggttcccgacgataat
ccgaccggcgtctatcgccgtcggtttacgcttgctcccgactggcgcggacggcggatc
gtgctgcacattgccgggtgcgagggcgcgtgttatgtgtatctcaacgatcaacccgtc
ggttttcataaggactcacgcacccccgcagagtacgatgtgaccggcgtggtgcgcttc
gatgcgccgaatgaactgattgccgttgtgctgcgctggtccgacgccagtttcatcgaa
gatcaggatcactggtggcaatcgggcattcaccgtgatgtgtttctctatgccaccgat
accgtctatctggcggatctgtcagtacgcgcggatgtgagcgatgatctgcaggagggc
atacttcgggtgcgctgcacccttgatgctatcggtgaagccggggagcatacccgcgtc
gaagcgcaactctatgatgcgcacgggacgcagatgtttgctgagccgctcggcgccacc
tatacgcagacccatccacgcttcggggtgcgtcgctttgtgcgcccggaactgcttctg
gagggacatgtaccgtcgccacatctgtggtcggcggaaacgccatacctgtacacattt
gtcgtgaccgtgtatggaccggctggaccagagagaagtgcgtgccgggttggtttccgc
tcgatagccattcgtcaccgtcaactgctggtgaatggtcgggcgatcaccatcaaaggg
gtcaaccgtcacgatcattccgatacgaccggcaaagcagtcagtcgggaattgatggaa
ctcgacattcaacgcatgaagcagttcaacatcaacgctgtgcgtgcgtcgcactacccg
aatgacccatactggctcgatctatgcgaccgttatggtttgtatgtgatcgatgaggcg
aatatcgaggcgcacgcattctacttcgacctttgccgcgatgcgcgctacacgcgggcg
tttgtcgaacgggtgcggaacatgatcgagcgcgacaaaaatcatccctcgatcatcctc
tggtcgctggggaatgagagcggatacggtccgaatcacgatgctgccgccggtcttgcg
cgtcgtctcgatccgtcacgaccgctgcactacgagggcgccatctcacgctggatgggc
gagtcgtggcatggtggacgcactgtgaccgatgtgatctgcccgatgtatgcctccatc
gaggagattgttgcgtgggctgagcaggaaaccgacgatccacgcccgttgatcctctgt
gagtattcccatgcgatgggaaacagtaacggcagtctggcagattactgggaagcgttc
gagcgctatccagcgctacaaggcggtttcatctgggaatgggtcgatcacggcatccgt
gcgaccgatgcgcaggggcgcgtctactgggcatacggcggcgattttggcgatgtcccc
aacgatgccaactttgtgtgcgatggtctggtctggcccgaccgcacaccccatccggcg
ttgtacgagtacaagtatctgatccagccggtgcgcgtcgaactggtcgatccgtctgga
acgatgctgcggatcgtcaatcgccacgattttgccagcatcgattggttggacggggtg
tgggaagtgattgctgacggcgtgccggtggcatctggcaggttgcccgaacttcatgcc
gcaccgggcgaagcgcaggtggtgaaactggatctcgacgcagcgcatggagcgggcgaa
cgtttcctgacggtgcgcttctaccagcgtgaagcgactctctgggcgcctccagggcac
gaggttgcctggcagcaactcccgcttccaacggtcgccgcgatgcctgaaccggttatt
gcgggcgaatctgtggtggtggagcagcgtccggatcgtatcacgctgcgcgctggcgcc
acgcacgccgtgttcgacgtcaggagcgggactctggcatcgtttgggcgcgatgagcaa
aacctgatcgttcgtggtccgttgctcaacgtctggcgggcggcaaccgataatgacggc
ttgaaactgcgggacgaaccggagaagccgctggcgcgctggaaggcgttgggtctgcac
cggttgcaccatcgcctgaaccacatacgagtggttgccgttgacaacggggcggcgtcg
gttgaaatcgagcacgccgccaccggtcgcgaccgttggggcgattttatccatatccat
cgctacaccctgcacgccgacggcgaactatcggtagagaacaccgtcatcatcggcaat
gccatcagcgatctcccgcgcgtcggggtatgcatgctactgacgcctggtttggaacat
ctcgaatggtatggacgcggtccgtgggacaactacagcgatcgcaaggcaagcgcctta
atggggcgctggcgttcgaccgtgaccgaccagtacgtgccgtacattatgccgcaagag
catgggcacaaaactgatgttcgcttcctgctgctgaccgatcaggacaggcgtgggttg
ttcatcggcggacagccgaccttcgagttttcggcgctacaccacagcgacgatgacctg
tttcgcgccctgcacactatcgacctgacgccgcgtgctgaggtctttctcaatctcgat
gcagcgcatcgcggtttgggaaccctgagttgcggacctgacacgctcgaacagcaccgt
ttgatggactcagtgtatcggtttgggtatcggatgcgggcagtgtcgtcggatgttgga
tag
DBGET
integrated database retrieval system
