Roseiflexus sp. RS-1: RoseRS_2717
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Entry
RoseRS_2717 CDS
T00542
Name
(GenBank) ABC transporter related
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RoseRS_2717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrs02000
]
RoseRS_2717
Transporters [BR:
rrs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RoseRS_2717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA
AAA_21
AAA_30
AAA_16
SMC_N
TsaE
SbcC_Walker_B
RsgA_GTPase
SRP54
Zeta_toxin
DEAD
AAA_23
AAA_29
ABC_membrane_3
MMR_HSR1
DO-GTPase2
NB-ARC
LptE
Motif
Other DBs
NCBI-ProteinID:
ABQ91090
UniProt:
A5UWT7
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All DBs
Position
complement(3378634..3380460)
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AA seq
608 aa
AA seq
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MMHMLQRVAELPQERAEQRGAVARRLLGYLRPYWRRLLAILVLVVIAATSQALGPLLIGV
AIDGAIAQRDGNELNRLMLLLLVVYVAGLAAGRYQFMLMGEVGQQVLAQLRSEIFAALQR
MSLRFFDRRPAGELMSRVVNDTEVITQLMGQGLVQVLGSLFGLIGILVAMIALDWRLALA
SFVVIPVMIWMTGLFSQLSRRAFRRTRATIGDVSADIQEEIAGVKVAQAFTRTALNQQRF
AERNAANRDANVNATAITSAFMPAVDILSTVAVAIVAGFGGWLVLQDVVTIGVVVAFLTY
VQQFFRPVQALSAFYTTAQSALAAAERIFALLDTPPNLVDAPDAQELPRIEGRVEFDHVW
FSYGARPGDQPVDEERYVLKDICLVAEPGQTIALVGPTGAGKTTLVNLIGRFYDVSAGAV
LIDGVDVRRVTRASLRSQMGVVLQDSFLFSGTIADNIRYGRLDATDEEVEAAARTANAHD
FIMRLPDGYQTHLSERGSNLSQGQRQLIGIARAILADPRILILDEATSSVDTRTEQLIQQ
ALRRLLRGRTSFVIAHRLSTVHDADLVLVLDQGRIVERGTHKELLARGGLYAELHRRQFR
DEPLLWAA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatatgttgcagcgggtcgccgagttgccgcaagagcgggcggaacagcggggc
gcggtcgcgcgtcggctccttggctatctgcgcccctactggcggcgattactggcgatc
cttgtgctggttgtgattgcagcaacgtctcaggcgctgggtccgttgctgatcggcgtg
gcgattgatggcgcaatcgcacagcgtgatgggaacgaattgaatcgcctgatgctattg
ctcctggtggtgtatgtcgccggtctggctgccggacggtatcagttcatgctgatgggt
gaggtggggcaacaggtgctggcgcagctgcgcagcgaaatcttcgctgcattgcagcgg
atgtcattgcgcttcttcgaccgccgcccggctggtgagttgatgtcgcgtgtggtgaac
gacaccgaagtgatcacccagttgatgggtcagggtctggtacaggtgctcggcagcctg
ttcggattgatcggcatcctggtggcaatgatcgccctcgactggcgactggcgctggca
agcttcgtcgttatcccggtgatgatctggatgaccggtctgttctcgcagttgtcgcgc
cgggcgttccgacgcacccgtgcgacgattggcgatgtgtcggcggatattcaggaagaa
attgcaggcgtcaaggttgcgcaggcgtttacgcgcactgcgctcaaccagcagcgcttc
gcggagcgcaacgcggcgaaccgtgatgcaaacgtgaatgcgaccgcgattacgtcagcg
tttatgccagctgtggatatactctcgaccgttgctgtcgctatcgtggcagggtttggc
ggctggctggttctgcaagacgtggtgaccatcggtgtggttgtggcattcctgacctat
gtgcagcagttcttccgcccggtgcaggcgctttcggcgttttatacgactgctcagtcg
gcgctggcggcagcggagcgtatttttgcgctgcttgacacgccccccaatctggttgac
gctcccgatgcgcaggaactgccacggatcgagggacgggtcgagttcgatcacgtgtgg
ttcagttatggcgctcgccccggagatcaaccggtggatgaagagcgctacgtgctcaag
gatatctgcctggttgccgagccagggcagacgattgcgctggttggtccgaccggcgct
ggcaaaacgacgctggttaacctgatcggacgtttctacgatgtcagcgccggggcggta
ttgatcgacggcgttgatgtgcgcagggtgacgcgcgccagtctgcgctcccagatggga
gttgtgctccaggatagttttctcttctccggtacaatcgccgataacatccgttatgga
cgcctcgacgcgaccgatgaagaggttgaagcggctgcaaggactgcaaatgcgcatgat
ttcatcatgcgactgccggatgggtaccagacgcacctgagtgaacgggggagcaacctc
agtcaggggcaacgtcagttgatcgggattgcacgcgcaatcctggcagacccacgcatc
cttattctcgatgaggcgaccagcagcgtcgatacgcgcaccgaacagttgatccagcag
gcgctgcgtcgtttgctgcgtgggcgcaccagtttcgtcattgcccaccgtctctcgacc
gtgcacgatgccgatctggtgctggtgctcgatcaggggcgaatcgtcgagcgcggcaca
cacaaagaactgctcgcgcgcggcggattgtacgccgaattgcatcgccgccagttccgc
gatgaaccgctgctctgggcagcgtga
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