Roseiflexus sp. RS-1: RoseRS_3706
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Entry
RoseRS_3706 CDS
T00542
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RoseRS_3706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_3706
DNA repair and recombination proteins [BR:
rrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RoseRS_3706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_22
AAA_14
ATPase_2
AAA_27
Rad17
AAA_23
nSTAND3
DAP3
Motif
Other DBs
NCBI-ProteinID:
ABQ92060
UniProt:
A5UZK7
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Position
4637360..4640617
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AA seq
1085 aa
AA seq
DB search
MTPAERRAFERQLQQEFPGLELHAWYRQYRSLKAAHPDAILLYRLGDFYETFDDDAKLVA
DLLEVTLTYKEFASQKGRDQKQRCPMAGIPYHAVEGYVARLVGAGYRVAIAEQITETPSS
RTDTRPRSIFAAGIEQTSLTGSNRMVERKVVRVITPGTIIESGMIPAERNNYLAALIADH
GRIGLAYADLSTGEFAAVEFSGERAAQQAQGELTRLNAAEILVPDRADLRLPGLEPSSAR
LEQDLEFLTREERELLLPGERVARRVERENNARWAHGRVTAWPERRWDLRNAHDTLLHQF
GVRSLAGFGLEDRPLAIRAAGAIVQYARETQQGVVANLRSIRAYTPGDAMFLDPQTQRNL
ELLEGASGTTRGSLIGVLDQTRTPMGARLLRRWVSQPLCDLTRLHARHDAVERFVTDAIL
RASVRETLRRVGDMERVVNRIIQGVGVATPRDMARLRDALRALPELVAALGDWTPPPGEI
DLTGVRTLPPSAATDPVSLTENGNERIEPNQTSAVSLRAQREARRRVSARYADEDLFGEE
EQNAPPVGSSNHAVGTQPSADDEASPVTAFVDDQATETLALDPCADMLAFLETAIDDEPP
ALLGASNYLRAGENGEPPRRVIRPGFEPEIDQVVAASRDAQRWISELEPKERERTGIKSL
RVDYNRVFGYYIEVPKTYADQVPKHYIRKQTLTTGERYFTDELKRYEEIVEQAQQRLIDL
ERRAFARICDVVTGAGARLLRTARMIATIDVFAALAEAAVRGRYVRPELYDDTRLRIVGG
RHPVVEQTLDETFVPNDIEMDTETRQICLITGPNMSGKSTVLRQVALIALMAQIGSFVPA
DAAEIGLVDRIFTRIGAQDDIATGRSTFMVEMTETAALLAQSTRRSLIILDEVGRGTSTY
DGMAIAQAVIEYIHNEPRLGCRTLFATHYHELTDLERTLPRLKNYHMAATEQDGRVVFLH
ELRPGGADRSYGIHVAELAGIPQSVIRRASELLAELERRAPRSAPPTVPARGDDRRSAGR
ASSSGAGAARGEQGRTLPDGQLSLFDLAPGPVIEMLRRIDINQLTPLEALNKLHELQKLA
RAGGG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgccgagcgccgcgccttcgagcgccagttgcagcaagagttccccggtctc
gagttgcacgcctggtatcgccagtatcgcagcctcaaagctgcgcaccccgacgctatt
ctgctctaccgtctgggcgatttttacgagacgttcgacgatgatgccaaactggtcgcc
gatctgctcgaagtgacgctgacttacaaagaattcgccagccagaaggggcgcgaccag
aagcagcgctgcccgatggcaggcataccgtaccacgcggtcgaagggtatgtggcgcgg
ctcgtcggcgccgggtatcgcgtcgctatcgccgagcagatcactgagaccccttccagt
cgcaccgatacgcgcccacgttcgatcttcgccgctggcattgagcaaacgtcgctcacc
ggcagcaaccggatggtcgagcgcaaggtggtacgggtgataacgcccggcacgatcatc
gaaagcggcatgatccctgccgagcgcaacaactaccttgccgctctgatcgccgatcac
gggcggatcggtctggcatacgccgacctgagcaccggtgagttcgctgccgtcgagttc
agcggcgaacgtgcggcgcaacaggcgcagggagaactgacgcgcctcaatgccgccgaa
atcctggttcccgaccgcgccgacctgcgcctgcccggtcttgagccgtccagcgctcgc
ctcgagcaggacctggagttcctcacccgcgaagagcgcgaactgctccttccgggtgaa
cgggtggcgcggcgtgttgagcgtgaaaacaacgcgcgctgggcgcacgggcgcgtgacc
gcctggcccgaacgacgctgggatctgcgtaatgcgcacgatacgctgctccaccagttc
ggcgtccgttcgctcgccggtttcgggctggaagaccgtccgctggcgatccgcgccgct
ggcgctatcgtgcagtacgcgcgcgaaacgcagcagggagtggtcgcaaatctgcgctcg
atccgcgcttacacccccggcgatgcgatgttcctcgatccgcagactcagcggaacctc
gaattgctggaaggcgccagcggcacgacgcgcggctcgttgatcggtgtgctcgatcag
acgcgcacaccaatgggggcgcgcctgctgcgccgctgggtttcgcagccgctgtgcgat
ctgacgcggctgcatgcccgccacgacgcagtggaacgctttgtcaccgatgccatcctg
cgcgcatcggtgcgcgaaaccctgcgacgagtcggcgacatggaacgggtcgtcaaccgg
atcattcagggggttggggtggcaacgccgcgcgatatggcgcggttgcgcgatgcgttg
cgtgcgctccctgaacttgtcgccgcgctcggcgattggacgccgccgccgggcgagatc
gatctcactggtgtgcgcaccctcccgccgtccgcagcgaccgatcccgtgtcgctgacg
gaaaacggcaatgagcgcatcgaaccgaaccagacgtcggcggtcagtctgcgcgcacag
cgcgaggcgcgtcggcgggtatcggcgcgctacgccgatgaagacctgtttggggaggaa
gagcaaaacgcaccgcccgtcgggtcgtcgaaccatgccgtcggaacacaaccatcggca
gatgatgaagcctctcccgtcacagcgttcgtggacgaccaggcgaccgaaacgctggcg
cttgatccgtgcgccgatatgctggcattcctggagaccgccatcgatgacgagccgcct
gcgctgcttggcgcgtccaactatctgcgcgcaggggagaacggcgagccgccgcgtcgc
gttatccgccccggttttgaaccggagatcgatcaggtggtggcggcaagccgtgacgca
cagcgctggatcagcgaacttgaaccgaaagagcgggagcgcaccggcatcaagtcgctg
cgcgtcgattataaccgcgtctttggctattacatcgaagtgcccaaaacctacgccgat
caggtgccgaaacactacatccgcaaacagacgctgacaaccggcgaacgctatttcacc
gatgaactcaagcgctatgaggagatcgttgagcaggcgcagcagcgtttgatcgatctc
gaacgacgcgcttttgcgcgaatctgcgatgtggtgaccggcgccggagcgcggttgttg
cgcacggcgcgcatgatcgcaaccatcgatgtgtttgcagcgctggcggaagcggcagta
cgcgggcgttacgtgcgccccgaactgtacgacgatacccgcctgcggatcgtcggcggg
cggcatccggtcgtcgagcagaccctcgatgagacgttcgttccaaacgacatcgagatg
gacacggagacgcgccagatctgcctgatcaccggtcccaatatgagcggcaagagtacg
gtgttgcgccaggtggcgctcatcgccctgatggcgcagattgggtcattcgtacccgcc
gatgccgccgagatcgggctggttgatcgcattttcacgcgcatcggcgctcaggacgat
attgccaccggtcgtagcacgtttatggtcgaaatgaccgagactgcggcattactggcg
cagagcacccgtcgcagcctgatcatcctggacgaggtcggtcgcggcaccagcacctac
gacgggatggcaattgcgcaggcggtcatcgagtacattcacaacgagccgcgtcttggg
tgtcgcaccctcttcgcaacccattaccacgaactgaccgacctggaacgcaccctgcca
cgtctcaagaactaccacatggcagcaaccgagcaggatgggcgggtagtgtttctccac
gaactgcgtcccggcggcgccgaccgctcgtatggcattcacgttgcggaactggcgggc
atccctcaatcggtcattcgtcgggcgagcgagttactggcggaactggaacgccgcgcg
ccgcgcagtgcgccgccgacggttcctgcacgcggtgacgaccgccgatctgcgggacgt
gcgtcatcgtccggtgctggcgcggcgcgcggcgagcagggtcgcacgcttcccgacggg
caactctcactcttcgacctggcacccggaccggtgatcgagatgctgcgccggatcgat
atcaatcagttgacgccgctggaggcgctcaacaaattgcatgaactgcaaaaactggcg
cgcgctggcggcgggtga
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