Roseiflexus sp. RS-1: RoseRS_4199
Help
Entry
RoseRS_4199 CDS
T00542
Name
(GenBank) putative PAS/PAC sensor protein
KO
K17763
rsbT co-antagonist protein RsbR
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrs03021
]
RoseRS_4199
Transcription machinery [BR:
rrs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RoseRS_4199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
STAS
PAS_3
PAS_8
PAS_11
STAS_2
PAS_7
DUF6399
CbbQ_C
DMPK_coil
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ABQ92542
LinkDB
All DBs
Position
complement(5259455..5261143)
Genome browser
AA seq
562 aa
AA seq
DB search
MNIADSVPDPANPVALTDCLAQMERLQRIVETSNQLMFEVDPGGRFTCVNQAASTYFGVA
PAACPGQPVTAFVHPDDHEKVRQWFSERSANQQRHLSEEIRVVHRHGALFHMLWRMTFHR
DDTGRLQSITVITHDITEMKRQEETQRAFRLFIENSPDGFAIVDQNLRLTYTNHAFNAML
DEPSLVGRSVVELVCADDHATLVTAARTAERGQAAWDIVRYVRSDGTLITVHTGIIGLCD
HQGNLIAYALVNRDMTSQLQAETELRRSEQRNRALLAAIPDLMFVLSADGIFLDYKADKL
LLPPEAFLNRHVNEVLPPPLAAQALSHLECLKRTGEMQVYEYQIEFMGQIEEYEARMVPL
QDSALVLARDVTAHRRAERERVAMQEQIIQAQQAALRELSTPLMPIADGVVVMPLIGVID
SARAQQIMESLLNGVSEYKAHVALIDITGVKVVDTQVAGVLLRAAQAVRMLGAQVVLTGI
SPEIAQTLVHIGAEIRDVKTKATLQEGIRYAMTVGNRIMSASKWFTLRHAAAPVQAFACQ
KMNSSEAQGRTKVRPSPVQDAG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccgatagcgtccccgatccggctaaccctgttgctctcaccgactgcctg
gcgcagatggaacgtttgcagcgtattgtggagaccagtaatcaacttatgttcgaagtt
gatcctggcggtcgctttacctgcgtgaatcaggcagcctccacctactttggggtggcg
ccagccgcgtgtcctggtcaaccggtgacagcgttcgtccatcctgatgatcatgaaaaa
gtgcggcaatggttttcggaacggagcgcgaaccaacagcgacatctttcggaggagatt
cgagtcgttcatcgtcacggcgctctcttccatatgctctggagaatgacattccacagg
gatgatacaggacgcctccaatcgataactgtcatcacgcacgacatcactgaaatgaaa
cggcaggaagagacgcagcgcgcttttcggctgttcattgagaactcgcctgacggcttt
gcgatcgtcgaccagaatcttcgactgacgtataccaatcatgcattcaatgccatgctc
gacgagccgtcgctggtcgggcggtcggttgtcgaactggtgtgcgcagacgatcacgcg
acgctggtaacagccgccagaacagcagagcgtggtcaggcggcatgggacattgttcgc
tacgtgcgcagtgacggaacgttgataacagtccatacgggaataatcgggttgtgcgat
caccagggcaacctcatcgcctatgctctggtcaaccgtgatatgacttcccaattgcaa
gccgaaacagaattgcgccggagcgagcaacggaatcgcgctctgctggcggcaataccc
gatctgatgttcgtgctgagcgctgatggcatctttcttgattacaaggctgataagctg
ctcttgccgccagaggcgtttctcaaccgccacgtcaatgaggtgcttccaccgccgctt
gcagcccaggcgctttcccatctcgagtgtctcaaacgcaccggcgaaatgcaggtgtat
gagtatcaaattgagtttatgggacagatcgaagagtacgaagcgcggatggtaccgctc
caggatagcgcccttgtgctggctcgcgacgtcacggctcatcgtcgcgccgagcgcgaa
cgggtggcgatgcaggagcagattattcaagctcagcaggccgccctccgcgaactgagc
acgccgttgatgccaatcgccgacggggtggtggtgatgccattgattggggtgatcgac
tcggctcgtgcgcaacagattatggagagtttgctgaacggcgtgtccgagtataaggcg
cacgtcgctctgatagacatcactggcgtgaaagtcgttgacacccaggtcgccggagtg
ctcctgcgcgctgctcaggcagtccgcatgctgggcgcacaggtggttttgaccggtatc
agcccggagatcgcccagacactggtgcatatcggcgccgagatccgtgacgttaaaaca
aaggcgaccctccaggagggaattcgctatgccatgacggtcgggaaccgaatcatgagc
gccagtaagtggttcaccctccgccatgcagcagcgcccgtgcaggcgtttgcgtgccag
aagatgaactcgtcagaagcgcaaggacggacgaaggtgcgaccttcgcccgtccaggat
gcaggatga
DBGET
integrated database retrieval system
