Rhodococcus rhodochrous: 4535765_02618
Help
Entry
4535765_02618 CDS
T05521
Symbol
pafA
Name
(GenBank) 20S proteasome subunit
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rrt
Rhodococcus rhodochrous
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rrt03051
]
4535765_02618 (pafA)
Enzymes [BR:
rrt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
4535765_02618 (pafA)
Proteasome [BR:
rrt03051
]
Prokaryotic proteasome
Bacterial regulatory particles
4535765_02618 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
SNV19980
LinkDB
All DBs
Position
1:2808162..2809505
Genome browser
AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIFLFKNNTDSAGNSYGCHEN
YLVARVGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGSAALVLEMIEAGVPFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHARAVEYLHQREPDPHVAQVVDL
WGRVLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAARATDDESVDAAVNTPPQTTRAKLRGDFIAAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgagacggagttcggcgtcacgtgtaccttccacgggcatcgtcggttgagc
cccgacgaggtggcccgctatctgttccgccgggtggtgtcctgggggcgcagttcgaac
gtcttcctgcggaacggggcgcgactgtatctcgatgtcggctcgcaccccgagtacgcc
accgccgagtgcgacgacctgctccagctcgtcgagcacgaccatgccggcgagcgggtc
ctcgaggaactgctcatcgacgccgagcagcgtctcgccgaggaaggcatcggcggcgac
atcttcctgttcaagaacaacaccgattcggcgggcaactcctacggctgccacgagaac
tatctcgtcgcccgcgtcggcgagttctcccgcatctccgatgtgctgctgcccttcctg
gtgacccgccagctgatctgcggcgccgggaaggtgctgcagacccccaaggccgccacc
ttctgcctgtcgcaacgcgccgagcacatctgggagggcgtctcgtcggcgaccacccgg
tcgcggccgatcatcaacacccgcgacgagccgcacgccgacgccgagaagtaccggcgc
ctgcacgtgatcgtcggggactcgaacatgtccgagaccaccaccatgctcaaggtgggg
tcggcggcgctggtgctcgagatgatcgaggccggggtgccgttccgcgacttcgcgctc
gacaacccgatccgtgccatccgcgaggtctcccacgacctgaccggccggcgcccggtg
cgcctggccgggggccggcaggccagcgcgctggacatccagcgcgaataccacgcgcgg
gcggtggagtatctgcaccagcgcgaacccgatccgcacgtcgcgcaggtggtggacctg
tggggccgtgtcctcgacgccgtcgaatcgcaggacttcgcgaaggtcgacaccgagatc
gactgggtgatcaagcgcaagctgttccagcgctaccaggaccgctacagcatggagctg
tccgacccgaagatcgcccagctcgacctggcctatcacgacatcaagcgcggtcgcggc
gtgttcgacctgctgcagcgcaaggggctggcggcgcgggccaccgacgacgagtccgtc
gacgcggcggtgaacaccccaccgcagaccacccgcgcgaagctgcgcggtgatttcatc
gccgccgcgcaggccgcgggccgcgatttcaccgtcgactgggtgcacctgaagctcaac
gatcaggcgcagcgcaccgtgttgtgcaaggacccgttccggtcggtggacgaacgcgtc
gaacggctcatcgcctccatgtga
DBGET
integrated database retrieval system
