Rhipicephalus sanguineus (brown dog tick): 119387034
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Entry
119387034 CDS
T07382
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119387034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119387034
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119387034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_1
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_11
TPR_17
TPR_6
TPR_7
ANAPC3
ARM_TT21_C
ARM_TT21
TPR_10
HEAT_Nup120
Coatomer_E
Wzy_C_2
HrpB1_HrpK
COG4_N
DUF2989
TPR_4
Motif
Other DBs
NCBI-GeneID:
119387034
NCBI-ProteinID:
XP_049270068
LinkDB
All DBs
Position
3:complement(121619292..121681975)
Genome browser
AA seq
1518 aa
AA seq
DB search
MDSKEVKQALKDAREAIRQKEFKAALKHCKTALKIDKECYMAWVFVGAAAQEIDQLEQSV
AAFKKACGICPDQILAWQGLCALYEKHQSVGDFENDRHSVYMKLIELTQNDATKQVEIAD
KLTSHYRNSGNAGKYLSTLEECVQIIGTQPETTKLWKSLVDFSSNKLVTYPKNHQELLVK
AYAHLAFSSETERPRRDALCRSYVDALCKTGHRDDVIREALRFGESFPESSVPMEVISGM
YVDMTLSSWEEPKPSAEIDKIEELTKSRPNLQVGWLAKATHLYASGNATDALEALAKAVE
VGRSSREASLLLSLCSLKTYNFRKAEVHAQNGLSLSSGASDWMSQKLFLCLAESLCAQQC
HEEASAALQKIGEEHARQPAVLWCLFETALQSGNFDKAEEVLSSLQEIGFESSRMKGAQA
RLLIQREQITEAQEILTNLEEKSPEATHLLALTHWKLGRYDEAVPIFLEAARLDPQDYRN
FLYLGRHYFYHLKDVQKAVRCFQKAFQLNRASEEAGSLLSDALCDLGQHEQNVKFLEAIT
SQLPVKRAKWAWLRLGLQQLRLGSATEAVQSLQNSLRADPSDKSCWECLGEAYLMRESLG
AALLCFKKCLDEDPKDLFSLYETATIKSRQGLHKEAADNFQEALEVNPEYVPAIKGLAEA
KLALAREHLEQGLCGLGLDDCQQALEAAARALALQRRLVCLWKLAGDICLVPAAYGINWS
SLKLPTSLLEGEQQDSGQEQLIKASQKCYMTAIRMKPRLASLWHDLGLALWLEARLQKGS
FAKALASVRNAVTLKPSCFAYWNSLGVLAVSSGAENYGLAQHCFIKSLELESNNLYAWTN
LGALYLQAGNVQLAHQAFAKAQSVEPTAMRPWVGQAFIAEKVQHHDTVDLFRHCMGLGNH
GDAARAYASFLCKESGPTVAQKHGRDILVVASDALSRTVDLEGALDPAALNMLGILLERQ
GLLRSARDAYKKALTLPGQNDDNINCSSCEPGTCTLAFSVPLGCYEEAIQLCLQTGSRSK
DVLSLLGFCYGKLGEFSEALKVYEEALSKSPPEKKGEVELGMAMVTLKASGAAAAKDFLQ
NRLSSMPQSREALEALCCLSLLAGDSSACRSSTQKLMTLSKKGTALHERTASLLCCQQFM
KGTDARQACHVLSRAVHLHPDEGPLWSALTQALLLEKRPSALCCALAGLVLGERSPRHMT
MIVLARLMQGKAKEALRAAQKMVHLYPDSHSGWVLLGLAISECRVVADKALQHDRFLLGA
NTLWKLWSNLVQVQYACVHHRWQKVSELVPLVLWGFAGSSLVSKSLNVLQAISELLVKTS
RLEKTSLSSIQSTVESEDIATGWQMLSKLQQRTEDYSGAIESLERAKKYDGLQGKILELE
LCQAWLALRSAKADSHQCEGMLKAALGYLNTALRTNPRCRAGHMVLGVWALENNNTRLAK
KSLERVMRFHDGGSSWIQSATLKLLLLHYLEKKDADALKKLLPQAEEQLDMQSLLSEENR
DQLISMGVLFNASELKKH
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagaagtgaagcaagcactaaaggacgcaagagaagcaatcagacaaaaa
gagttcaaagccgccttgaagcactgcaagactgccttgaaaatagacaaggagtgctac
atggcttgggtgtttgttggagctgcagcacaagaaattgaccagctagagcagtctgtt
gctgcattcaagaaggcttgtggcatttgccctgaccaaattctggcatggcagggcctc
tgtgctctgtatgagaagcaccagagcgtgggagattttgaaaatgaccgccattccgta
tacatgaaacttattgagcttacccagaatgatgctacaaagcaagttgaaatagctgac
aaactcaccagtcactacaggaacagtggaaatgctggcaagtacttgagtacattggaa
gaatgtgttcaaataataggcacccaaccggagaccacaaagttgtggaaatctcttgtg
gatttcagcagtaacaagcttgttacgtaccccaagaaccaccaggagttgcttgtgaaa
gcttatgcacacctggccttctcgagtgaaactgaacgtccccgcagagatgcactttgt
cgatcctacgtggatgctctgtgtaagactggtcacagggatgatgtaattcgtgaagcc
ctaaggtttggtgagagctttccggagtcgtcggttcccatggaagtcatcagtgggatg
tatgtggatatgactcttagcagttgggaagaaccaaagccttcagcagaaatcgacaaa
atcgaggaacttaccaaaagccgtccaaaccttcaggttggctggctagcaaaagcaacc
cacctgtatgcttctggaaatgcaactgatgctctcgaggcactggccaaagctgtggag
gtagggcgtagctccagggaggccagcctgttgctttccttgtgcagcctgaagacatac
aacttccgcaaggctgaggtgcatgcccagaatggtctctctttgtcatcgggagcgagc
gactggatgtcccaaaaactctttctgtgtttggccgagtctctctgtgcacagcagtgt
cacgaagaagcatcagcagctttacaaaagattggagaggaacatgcgaggcagcccgca
gtcctgtggtgcctttttgaaactgctttgcagtctggcaactttgataaagcagaagag
gtcctcagctctttgcaagagattggttttgaaagctcaaggatgaaaggtgcacaagcc
aggctgcttatacagcgtgaacaaataacggaggcacaggaaatcctgacaaacttggaa
gagaaatcaccagaggccacccatctgcttgcactcactcactggaaacttggccgatat
gatgaagctgtgccgatctttctagaagcagctcgtttggatcctcaggactaccgcaat
ttcttgtatcttggaagacactacttctatcatcttaaagatgttcagaaagctgttagg
tgttttcagaaagcttttcaactcaaccgagccagtgaagaagctggatctctcctgagt
gacgccctatgcgacctaggtcagcacgaacaaaatgttaaattcctggaggcaattacg
agccaactgcctgtgaagagagcaaagtgggcctggttgaggcttggcctccaacagtta
agacttggcagtgctacagaagccgtacagtctctacagaactcgcttcgagctgatcct
agtgacaagtcttgctgggaatgcctaggagaagcatacctcatgcgggagagccttggc
gctgccctcctgtgtttcaagaagtgccttgatgaagatcccaaagatctcttttcgcta
tatgagacagccacaatcaaatcccgtcagggcttgcacaaggaggctgcagataacttt
caagaagctcttgaagtcaatccagagtacgttcctgcaatcaaaggtcttgcggaagcc
aagctagcactggcgcgagagcacttggagcaagggctctgcggtcttggcctggatgac
tgccagcaggcactggaagctgctgctagggccttggcacttcaaaggcggctcgtatgt
ctgtggaagctggcgggtgacatttgcctggtccctgctgcatatggaatcaattggtcc
tctctgaagcttcccacttccttgttggaaggggaacaacaggacagtggccaggagcag
cttataaaggcatcacaaaaatgctacatgacagctattcgaatgaagccacggctggca
tctttgtggcacgacttgggcctggccctgtggctggaagcacgccttcagaagggaagt
tttgccaaagctttagccagtgtgcgcaacgctgttactctgaaacccagctgctttgcc
tactggaacagccttggggtactggctgtctcttcaggtgcagagaattatgggttggcc
cagcattgcttcataaaatccctagagttggagagcaataacttgtatgcgtggacgaat
ctcggtgccttgtacctccaggctggcaatgtgcagttggcgcaccaagcttttgcgaaa
gcccagtctgtagaaccaacagcaatgcggccgtgggtgggacaggcattcattgccgaa
aaagtacagcaccacgacactgtcgacctgttcagacactgcatgggactcgggaaccac
ggtgatgcagctcgtgcctatgccagctttctatgcaaggagtccgggccaactgttgct
cagaagcacggcagggatatcttagttgttgcctcggatgctctttcgcgcactgttgat
ttggaaggagccttagatcctgccgcactgaacatgctaggcatattgctagaacgccaa
ggactactaagaagtgccagggatgcctataaaaaggcactgacgttacctggtcaaaac
gatgacaatatcaactgcagttcgtgtgaacctggcacgtgtactttggcattttcagtc
cccctcggttgttacgaggaggccattcagctctgcttgcaaacagggtcacgctcaaag
gacgtgctcagccttcttggtttttgttatggaaagctgggtgaattttccgaagcctta
aaagtgtatgaggaagctctgtcaaaaagtccacccgagaagaaaggagaagtggagcta
ggcatggccatggtcacactgaaggcttctggagcagcagctgctaaggatttccttcaa
aacaggttaagcagcatgccacagtctcgtgaggctctggaggctctctgctgcctgtcc
ttgcttgctggagacagtagtgcttgccgcagttccactcagaagctcatgacattgagt
aaaaaaggcacggcacttcacgagaggactgcatcactgctctgctgccagcagttcatg
aagggcaccgatgctcgccaagcctgtcatgtactcagtagagctgtgcatctgcaccca
gacgagggccccttgtggtcggcattaacacaagccctgctgttggagaagaggcccagt
gctctctgctgtgccttggccggtctcgttcttggagaacgctccccacggcacatgacc
atgattgtgcttgctaggctgatgcaaggaaaggccaaggaggccctgagagctgctcag
aagatggtccacctctaccctgactctcactcgggctgggtgcttcttggacttgccata
agcgaatgccgagtcgtggctgacaaagctctgcagcatgatcgctttctacttggtgcc
aacactttgtggaagctttggtccaaccttgtccaagtgcagtatgcctgcgtccaccat
cgatggcaaaaggtttcagagcttgtgcccctggttctctggggattcgctggcagctca
cttgtgtccaagtcactgaatgtgttgcaggcaatttcagaattactggtgaaaacttca
cgtctggagaaaacttctctgagttctattcaaagtacagttgaatctgaggacatagct
actggatggcagatgctctcaaaactgcagcagagaactgaagactatagtggggctatt
gagtcactggagagggcaaagaagtatgatggcctgcaaggaaagatcctggagttagaa
ctgtgccaagcatggttggctttgcgttctgcaaaggccgactctcaccaatgtgaaggt
atgctaaaggctgccctaggatatctcaacacagcactgagaacgaatcccagatgcaga
gcgggtcacatggttcttggtgtttgggcactggagaacaacaatactaggctggcgaag
aagagccttgagcgagtgatgagatttcacgatggcggaagctcctggattcagtctgcc
acattgaagctgctgcttttgcactacttggaaaagaaggatgctgatgcactgaagaaa
ctgctacctcaagcagaggagcaactagacatgcagtcgcttttgagtgaagaaaaccga
gaccagctcatctcaatgggcgttttatttaatgcctcagaattaaaaaagcattga
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integrated database retrieval system
