Ralstonia solanacearum CFBP2957: RCFBP_10415
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Entry
RCFBP_10415 CDS
T01272
Symbol
rpoB
Name
(GenBank) RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RCFBP_10415 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsc03021
]
RCFBP_10415 (rpoB)
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_10415 (rpoB)
Enzymes [BR:
rsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RCFBP_10415 (rpoB)
Transcription machinery [BR:
rsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RCFBP_10415 (rpoB)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RCFBP_10415 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CBJ41722
LinkDB
All DBs
Position
431189..435295
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIQSYAQFLQEHVSVAQRKTEGLQAAFNAI
FPIVSHNGLARMEFVSYHLSHPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTKVKEI
KEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLKSDGA
LMEFVPERLRGEVARFDISDKNGKVVIEKDKRINAKHIRDLDAAGTKLISVPEDYLLGRV
LAKNIVDPDTGEVLANANDELTEGVLEKLRDAGVKEIQTLYTNDLDQGPYMSQTLRTDDT
VDQTAARIAIYRMMRPGEPPTEDAVEALFQRLFYSEDSYDLSRVGRMKVNSRLNRSEGIG
PMVLTDDDILDTIKLLVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQLNDYGFLETPYRKVEN
SKLTDEVHYLSAIEEGKYVVAQANATVDKDGNLVDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRADKPLVGTGIERTVAVDSGT
AVQATRGGVVDYVDANRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGVTRDKRAQSIIDEELK
RYRLDLNDQLRIVEGDAFQRLERLLVGKVANGGPKKLSKGTALTKEYLADLDKWHWFDIR
PSDEEVAAQLEAVKEAIEQKRHDFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGNMLKAQAKAAEIRKLLGQIYNESGKVEDLDSLSDAEVLELAENLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPADIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLERN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagctttaccgagaaaaagcgtattcgcaagagtttcgcgaagcgcgcaacg
gtccatcaggttcccttcctgcttgccacccagattcaatcgtatgcccagttcttgcag
gagcatgtgtccgtagcacagcgcaagaccgaaggcctgcaagcggcgttcaacgccatt
ttccccatcgtgtcgcacaatggtctggcacgcatggagttcgtgtcgtaccacctgtcc
cacccgccgttcgacgtcaaggaatgtcaacagcgtggtctgaccttccactcggcgctg
cgcgcgaaagtgcgcctgatcatcaacgaccgcgagaacccgaccaaggtcaaagagatc
aaggagcaggaagtctacatgggcgagattccgctcatgacgtccaccggttcgttcgtg
atcaacggcacggaacgcgtgatcgtgtcccagctgcaccgctcgccgggcgtgttcttt
gagcacgataagggcaagacgcacagctcgggcaagctgctgttctcggcacgcatcatc
ccttaccgtggctcgtggctggacttcgaattcgatccgaaggacatcctgtacttccgc
gtcgaccgccgccgcaagatgccggtgacgatcctgctgaagtcgatcggcctgacgccg
gaacagatcctggcgcacttcttcgtcttcgacaacttcacgctcaagagcgacggcgca
ctgatggagttcgtgcccgagcgcctgcgcggcgaagtcgcccgcttcgacatctccgat
aagaacggcaaggtcgtcatcgagaaggacaagcgcatcaatgccaagcacatccgcgac
ctggacgccgccggcaccaagctgatcagcgtgccggaagactatctgctgggccgcgtg
ctggcgaagaacatcgtcgacccggataccggcgaagtgctggccaatgccaacgacgaa
ctgaccgaaggcgtgctcgagaagctgcgtgacgccggcgtgaaggaaatccagacgctg
tacaccaacgatctggatcagggcccgtacatgtcgcagacgctgcgcacggacgacacg
gtcgaccagaccgccgcgcgtatcgccatctaccgcatgatgcgccccggcgagccgccg
accgaagacgccgtcgaagcgctgttccagcgcctgttctacagcgaagactcgtacgat
ctgtcgcgcgtgggccgcatgaaggtcaacagccgtctgaaccgctcggagggcatcggc
ccgatggtgctgacggatgacgacatcctcgacacgatcaagctgctggtgaacctgcgc
aacggcaagggcgaagtggacgatatcgaccacctcggcaaccgtcgcgtgcgttgcgtt
ggcgaactggcggaaaaccagttccgcgccggcctgtcgcgcgtcgagcgcgcagtcaag
gaacgcctcggccaggccgagacggaaaacctgatgccgcacgacctgatcaactcgaag
ccgatctcgtcggcgatccgcgagttctttggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtcggaagtgacccacaagcgccggatctcggcgctgggcccgggc
ggtctgacgcgcgagcgcgcgggcttcgaagtccgcgacgtgcacccaacccactatggc
cgcgtgtgcccgatcgaaacgccggaaggcccgaacatcggtctgatcaactcgctggcg
ctgtacgcgcaactgaacgactacggcttcctggaaacgccgtaccgcaaggtcgagaac
agcaagctgaccgacgaagtgcactacctgtcggccatcgaggaaggcaagtacgtggtg
gcgcaggccaacgcgacggtggacaaggacggcaacctggtcgacgaactggtgtccgcc
cgtgaaggtagcgagcgtgaaacgcggatggtcacgccggaccgcgtgcagtacatcgac
gtggcgccgtcgcagatcgtgtcggccgcagcttcgctggtgccgttcctggagcacgat
gacgcgaaccgtgcactgatgggcgcgaacatgcagcgtcaggccgtgccctgcctgcgt
gcggacaagccgctggtcggtaccggcatcgagcgcaccgtggccgtcgactcgggcacc
gccgtgcaggcgacgcgtggtggcgtggtcgactatgtcgatgcgaaccgcgtggtgatc
cgtgtcaacgacgacgaagccgtggccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatggtcaaggtgggc
gacatcgttgcccgcggcgacgtgatcgccgacggcgcctcgaccgacatgggcgagctc
gcgctcggccagaacatgctggtcgcgttcatgccctggaacggctacaacttcgaggat
tcgatcctgatctcggagcgtgtggttgcggaagaccgctacacctcgatccacatcgag
gaactgtcggtcgttgcccgcgacaccaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggccgaagcccaactggcgcgcctggacgagtctggcatcacgtacatcggc
gccgaagtcgaagccggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtccgacgtgaag
gacacctcgctgcgcgtgccctcgggcatgagcggcacggtgatcgacgtgcaggtcttc
acgcgtgaaggcgtgacgcgcgacaagcgcgcccagtcgatcatcgacgaggagctcaag
cgctaccgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggagcgtctgctggtgggcaaggtcgccaacggcggcccgaagaagctgtccaagggc
accgcgctgaccaaggaatacctggccgatctggacaagtggcactggttcgacatccgc
ccgtcggatgaggaagtggctgcccagctggaagcggtcaaggaagccatcgagcagaag
cgtcacgacttcgacctggcgttcgaagagaagcgcaagaagctcacgcagggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtctacctggccgtgaagcgccgcctgcag
cctggcgacaagatggccggccgtcacggcaacaagggtgtggtgtcgaagatcaccccg
atcgaagacatgccctacatggccgacggcacgcctgccgacatcgtgctgaacccgctg
ggcgtgccttcgcggatgaacgtgggccagattctcgaaacccacctgggctgggccgcg
cgcggtctgggcgagcgcatcggcaacatgctcaaggcgcaggccaaggctgccgagatc
cgcaagctgctgggtcagatctacaacgaaagcggcaaggtggaagacctcgacagcctg
tccgacgctgaagtgctggaactggccgagaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgacggtgcgcacgaggacgaaatccgccgcatgctggacctcgcctatccg
gcagacatcgcgaaggagaagggcctgaccgcttccaagcaacaggtcacgctgttcgat
ggccgcaccggtgaagccttcgagcgtccggtcacgctgggcgtgatgcacatgctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggtccgtactcgctggtg
acgcagcagccgctgggcggtaaggcccagttcggtggccagcgtttcggtgagatggaa
gtgtgggcgctggaagcgtacggcgcgtcctacgtgctgcaggaaatgctgacggtcaag
tcggatgacgtgaacggccggaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggaatcgttcaacgtgctggtcaaggaaatccgctcgctgggg
atcgacatcgatctcgagcgcaactga
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