Ralstonia syzygii subsp. celebesensis: JK151_19550
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Entry
JK151_19550 CDS
T07219
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rsg
Ralstonia syzygii subsp. celebesensis
Pathway
rsg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JK151_19550 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsg03400
]
JK151_19550 (uvrB)
DNA repair and recombination proteins [BR:
rsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JK151_19550 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JK151_19550 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
AAA_16
Nab1
Kinesin
AAA_22
Mu-like_Pro
HEM4
DUF87
Microtub_bd
FlaG
Motif
Other DBs
NCBI-ProteinID:
QQV57651
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Position
pRscUGMSS_Db01:complement(707137..709227)
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AA seq
696 aa
AA seq
DB search
MTDLSQVPSPYDESKFVTFDGSPFQLYQPYPPAGDQPEAIRQLFEGIGDGLSYQTLLGVT
GSGKTYTMANVIAQAGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSVNEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPTEYHQMILTL
RTGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEV
DSLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIETIKAELRERLDFFYKENKLV
EAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAQPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKETLSEYGFRLPSALDNRPLKFAEFEGKMRQVVFVSATPADYEK
QRAGDEVVEQVVRPTGLVDPIIHVRPATTQVDDLLSEIHERVKAGERVLVTTLTKRMAEQ
LTEFLSEHGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGTAILYADRITDSMRRAIGETERRRAKQIAHNEA
HGITPRGVVKRIKDIIDGVYNVDDARAELKAAQEAAKYEDMSEKQVGKEIKRLEKQMLDH
ARNLEFEKAAAVRDRLAKLKSQVFGASGEDHIVPAA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcagccaagtccccagcccgtacgacgagtcgaagttcgtcacgttcgac
ggctcgccattccagctgtaccagccgtatccgcccgccggcgaccagcccgaggcgatc
cgccagttgttcgagggcatcggggacggcctgtcgtaccagacgctgctgggcgtgacg
ggctcgggcaagacctacaccatggccaacgtgatcgcgcaggcggggcggcccgcgatc
gtgttcgcgcccaacaagacgctggcggcgcagctgtattcggagttccgcgagttcttc
ccgcgcaatgcggtcgagtacttcgtttcgtactacgactattaccagccggaagcgtac
gtgccgcagcgcgatctcttcatcgagaaggattcgtcggtcaacgagcatatcgagcag
atgcggctgtcggccaccaagagcctgctggagcggcgcgacgtggtgatcgtggccacc
gtgtcggccatctacgggattggtaacccgaccgagtaccaccagatgatcctgacgctg
cgcaccggcgacaagatcagccagcgcgatgtgatcgcgcgcctgatcgccatgcagtac
acgcgcaacgagacggatttccagcgcggcaccttccgcgtgcgcggcgacaccgtcgac
atcttccccgccgagcacgccgagatggcggtgcggctggagctgttcgatgacgaggtc
gattcgctgcaactgttcgacccgctcaccgggcgcgtgcggcagaagattccgcgcttc
acggtctacccgtcgagccactacgtgacgccgcgcgagaccgtgctgcgcgccatcgag
accatcaaggccgagctgcgcgagcggctggatttcttctacaaggaaaacaagctggtc
gaggcgcagcgcctggagcagcgtacgcgcttcgacctggagatgctgcaggagctgggc
ttctgcaagggcatcgagaactattcgcggcacctgtccggcgcgcagccgggcgagccg
cccccgaccctggtcgactacctgccgccggacgcgctgatgttcctggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggtgaccgcgcgcgcaaggaaacgctg
tccgagtatggcttccgcttgccgtcggcgctggacaaccggccgctgaagttcgccgag
ttcgagggcaagatgcggcaggtggtcttcgtgtccgccacgccggccgattacgagaag
cagcgcgctggcgacgaggtggtcgagcaggtggtgcgtcccacgggcctggtcgatccg
atcatccacgtgcggccggccaccacgcaggtggatgacctgctgtcggagatccacgag
cgcgtcaaggccggcgagcgcgtgctggtcaccacgctcaccaagcgcatggccgagcag
ctgaccgagttcctgtcggaacacggcgtcaaggtccgctacctgcactcggacatcgac
acggtcgagcgcgtggagatcctccgcgacctgcggctgggcaccttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctggacattcccgaggtgtcgctggtggccattctc
gacgccgacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgc
gccgcgcgcaacgtcaacggcaccgccatcctctacgcggaccgcatcaccgattcgatg
cgccgcgccatcggcgagaccgagcggcgccgcgccaagcagatcgcccacaacgaggcc
cacggcatcacgccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctac
aacgtcgacgatgcgcgcgctgaactgaaggccgcacaggaagccgccaagtacgaagac
atgagcgagaagcaggtcggcaaggaaatcaagcgcctcgaaaagcagatgctcgaccac
gccaggaacctggagttcgagaaggcggccgcggtgcgcgaccggctggccaagctcaag
tcgcaggtcttcggggccagcggcgaagaccatatcgtgccggctgcctga
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