Runella slithyformis: Runsl_4034
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Entry
Runsl_4034 CDS
T01553
Name
(GenBank) Lycopene beta and epsilon cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rsi
Runella slithyformis
Pathway
rsi00906
Carotenoid biosynthesis
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Runsl_4034
Enzymes [BR:
rsi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Runsl_4034
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Motif
Pfam:
Lycopene_cycl
NAD_binding_8
DAO
Pyr_redox_2
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEI50387
UniProt:
A0A7U3ZNF7
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Position
complement(4660299..4661456)
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AA seq
385 aa
AA seq
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MQKYDYIIAGGGLAGLSLAYYMNQTVLREKSILIIDQDTKTKNDRTWCFWEKDNQSPFDQ
IVHRSWQKVFFHGTNFSGTLNLGDYHYKWLRGIDFYHFVKTDLAKNPNILFVNERIERLK
DTPDGGFIITDQNQYLGEYVFDSTKPLKMDLEDSHNMLQHFKGWEIVADRPVFDTDCPTM
MDYRVEQRGVGVRFMYVLPESSTKAMIEYTVFSDSLLSPTEYDAELHKYIKEFLKIENFT
VEHEEFGVIPMTDEPITTHSGEHIIQIGTSGGYVKSSSGYAFQRTQRYTQALVKTLVTIG
KPLHPKKTFNKKFKELLDSTLLNVLLKDRALGKDVFTALYKKNPTPRLFAFLDEDTTLME
DLKIMSSVPLWAFTKGIVDALRKRI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatgactacatcatagcgggcggcggattggcagggttgagtttggcctat
tatatgaaccagaccgtactgcgcgaaaaatccattctcatcattgaccaggacaccaag
accaaaaatgaccggacttggtgtttttgggaaaaagataatcagagcccgtttgaccaa
attgtccatcgtagctggcaaaaagtcttttttcacggcactaacttctccggcaccctt
aatctgggcgattatcattataaatggcttcgcggcatcgacttctaccattttgttaaa
acagacttagccaaaaacccaaatatcctttttgtcaacgaacgtattgagcggctgaaa
gatacgcccgacggcggctttatcatcaccgaccaaaatcagtacctgggagaatacgtt
tttgacagcaccaagccccttaaaatggatttggaagatagccacaacatgctccagcat
tttaaaggctgggaaatcgtagctgacagacccgtttttgatacagattgtcccaccatg
atggactatcgagtagagcagcgtggggtcggcgtacgatttatgtatgtattgcccgaa
agctcgacgaaagccatgattgagtataccgttttctcagacagtctgctctcccctacc
gaatacgatgctgaacttcacaaatacattaaggagtttttgaagattgaaaattttacc
gttgagcacgaagaattcggcgtgattcccatgaccgacgagcccattacgactcattcc
ggtgagcacatcatacaaatcggcacatcgggcggctacgtaaaatcatcgtcgggatat
gctttccagcggacgcagcggtatacgcaggcattagttaaaacactggtaaccatcggc
aagccgctacaccccaaaaagacgttcaacaaaaaattcaaggagcttttagacagtaca
ttattgaatgttttgttgaaagatcgcgcgttgggaaaagacgtatttacggccctctac
aaaaaaaatcccacaccgcgtcttttcgcttttttagacgaagacacgaccctgatggaa
gaccttaaaattatgtcaagcgtgccgctttgggcgtttaccaaaggcattgtcgacgcc
ttacgcaaacggatctaa
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