Cereibacter sphaeroides KD131: RSKD131_2422
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Entry
RSKD131_2422 CDS
T00844
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03030
DNA replication
rsk03410
Base excision repair
rsk03420
Nucleotide excision repair
rsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSKD131_2422
03410 Base excision repair
RSKD131_2422
03420 Nucleotide excision repair
RSKD131_2422
03440 Homologous recombination
RSKD131_2422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsk03032
]
RSKD131_2422
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_2422
Enzymes [BR:
rsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSKD131_2422
DNA replication proteins [BR:
rsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RSKD131_2422
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RSKD131_2422
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSKD131_2422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ACM02282
UniProt:
B9KNW0
LinkDB
All DBs
Position
1:2463856..2466669
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AA seq
937 aa
AA seq
DB search
MTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLFRYVENNKGPDAP
THVAVIFDHSSKTFRNEIYPLYKAQRPEPPEDLRPQFPLTREATRAFNIACIETEGFEAD
DIIAALSCKARDAGGSVTILSSDKDLMQLVGDGVEMLDPMKNKRIGRDEVFEKFGVYPER
VVDVQALAGDSIDNVPGAPGIGIKTAALLIQEYGDLESLLARAGEIKQPKRRAAIEENAE
QIRISKRLVALDCNTPLTFSLEDLEVRLPVADDLLGFLNRMEFRTLTTRVAASLKVEPPP
APTAAVLRNEGVPEIVEQVEAALPFDSASYACVRDAEALAAWIARIRDLGHVAIDTETTS
LDEMRAELVGISLCVEAGAACYIPLGHRAGGGDLFGASELVADQMPLGLALSMLKPVLED
ESILKIGQNMKYDAKILARHGIRVAPIDDTMLMSYAMHAGRHGHGMDELCDTYLGHKPIA
IKTLLGSGKSQITFDRVPVEQAVCYAAEDADVTFRLWKLFKPQLHRARVTTVYETLERPL
VPVLAEMEMAGVQVDRDTLSRMSNAFAQKMAGLEAEIHALAGGPFNVGSPKQLGEILFEK
MGLPGGQKGKNGAWGTGADVLEDLAAEGHDLPARVLDWRQLSKLKSTYTDALQEHIHPET
GRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAPPGKLLVSLDYSQIELR
ILAHIADIPALKQAFREGHDIHAMTASEMFNVPLEGMDPMIRRQAKAINFGVIYGISGFG
LARNLRIPRADAQGFIDRYFERFPGIRGYMDETIAFAKANGHVETLFGRRINTPEINAKG
PGAGFARRAAINAPIQGTAADVIRRAMIRMPKAIRGMPATMLLQVHDELLFEVEEEAADA
LIERVREVMEGAADPAVKLTVPLTVEAGRGLNWAAAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcggcaagggccaccatctgcatctcatcgacggttcggccttcatcttccgg
gcctaccatgcgctgccgccgctgacgcggaagtcggacggcctgcccgtgggcgcggtc
gcgggcttttgcaacatgctgttccgctatgtcgagaacaacaagggccccgacgcgccg
acccatgtggcggtgatcttcgaccattcctcgaagaccttccgcaacgagatctacccg
ctctacaaggcgcagcgccccgagccgcccgaggatctgcgcccgcagttcccgctcacg
cgcgaggcgacacgggccttcaacatcgcctgcatcgagaccgaagggttcgaggccgac
gacatcatcgcggccctctcgtgcaaggcgcgcgacgcgggcggctcggtcacgatcctg
tcctcggacaaggatctgatgcagctggtgggcgacggcgtcgagatgctcgacccgatg
aagaacaagcgcatcggccgcgacgaggtgttcgagaaattcggcgtctaccccgagcgc
gtggtggatgtgcaggcgctggcgggcgattccatcgacaacgtgccgggcgcgccgggc
atcggcatcaagacggccgcgctgctgatccaggaatatggcgatctcgagagcctgctc
gcgcgggcgggcgagatcaagcagcccaagcgccgcgccgccatcgaggagaatgccgag
cagatccgcatctcgaagcggctggtggcgctcgactgcaacacccccctcaccttctcg
ctcgaggatctcgaggtgcgtctgccggtggccgacgaccttctgggctttctcaaccgg
atggaattccgcaccctgacgacccgtgtggccgcgagcctgaaggtcgagccgccgccc
gcgcccaccgccgccgtcctccggaacgagggcgtgcccgagatcgtcgagcaggtcgag
gcggcgctgcccttcgacagcgcctcctatgcctgcgtccgcgacgccgaggcgctggcc
gcctggatcgcgcgcatccgcgatctgggccatgtcgccatcgacaccgagaccaccagc
ctcgacgagatgcgcgccgaactcgtggggatctcgctctgcgtcgaggcgggggccgcc
tgctacatccccctcggccaccgggctggcggcggcgatctcttcggcgcctcggagctc
gtggccgaccagatgccgctgggtctggcgctgtcgatgctgaagcccgtgctcgaggat
gagtccatcctcaagatcggccagaacatgaagtacgacgcgaagatcctcgcgcgtcac
ggcatccgggtcgcgccgatcgacgatacgatgctcatgtcctacgcgatgcacgcgggc
cgccacggccacgggatggacgagctctgcgacacctacctcggccacaaacccatcgcg
atcaagacgctcctgggttcgggcaagagccagatcaccttcgaccgggtgccggtcgag
caggccgtctgctatgcggccgaggatgcggatgtgaccttccggctctggaagctgttc
aagccgcagctgcaccgcgcccgggtgacgacggtctacgagacgctcgagcggccgctg
gtgccggttttggccgagatggagatggcgggcgttcaggtcgaccgcgacacgctctcg
cgcatgtcgaacgccttcgcgcagaagatggcggggctcgaggccgagatccacgcgctg
gcgggcggcccgttcaacgtgggcagccccaagcagctgggcgagatcctgttcgagaag
atgggcctgcccgggggccagaagggcaagaacggcgcctggggcaccggggccgacgtg
ctcgaggatctggcggccgaggggcacgacctgcccgcgcgcgtgctggactggcgccag
ctctccaagctgaaatcgacctacacggatgcgctgcaggagcatatccaccccgagacg
ggccgcgtccacacctcctattccatcgccggggcgaacacgggccgcctcgcctcgacc
gatccgaacctccagaacatccccgtgcgcagcgaggagggccgccgcatccgtgaggcc
ttcgtggcgccgccgggcaagcttctggtcagcctcgactacagccagatcgagctgcgc
atcctcgcccacatcgccgacattccggcgctgaagcaggccttccgcgaggggcacgac
atccatgcgatgaccgcctccgagatgttcaacgtgccgctcgaaggcatggatccgatg
atccggcggcaggccaaggccatcaatttcggcgtgatctacgggatctcgggcttcggc
ctcgcacgcaacctgcgcatcccgcgggccgatgcgcagggcttcatcgaccgctatttc
gagcgtttccccggcatccgcggctacatggacgagaccatcgccttcgccaaggcgaac
ggtcatgtggaaaccctgttcggacgcaggatcaacacgcccgagatcaatgccaagggg
cccggcgcgggcttcgcgcgccgcgcggccatcaacgcgccgatccagggcacggcggcc
gacgtgatccgccgggcgatgatccggatgccgaaggcgatccggggcatgcccgcgacc
atgctgctgcaggtccatgacgaactgctgttcgaggtggaggaagaggccgctgacgcg
ctcatcgagcgcgtgcgcgaggtgatggaaggtgccgccgacccggcggtgaagctcacc
gtgccgctgacggtggaggcgggccgcggcctgaactgggccgccgcccactga
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