Ralstonia solanacearum PSI07: RPSI07_0617
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Entry
RPSI07_0617 CDS
T01273
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase (UDG)
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPSI07_0617 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_0617 (ung)
Enzymes [BR:
rsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RPSI07_0617 (ung)
DNA repair and recombination proteins [BR:
rsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPSI07_0617 (ung)
Prokaryotic type
RPSI07_0617 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBJ49982
LinkDB
All DBs
Position
complement(606984..607778)
Genome browser
AA seq
264 aa
AA seq
DB search
MTRRADPAQATLFDEPAGVPMATGGFIPLAHQFDALPADWKALLEPCLARTDWPALCAFV
DGERAAGKPIFPTEVFHALHLTPVDDVRVVILGQDPYHGTGTVDGREVPQAHGLAFSVPA
GVRVPPSLRNIYKEIEAEYDRKLPAGSGNLEGWAQQGVLLLNTVLTVEQGQAASHARRGW
ERITDCLLEHLARVGHRRVFMLWGSHAQAKRALLPEGHLVLEAPHPSPLSAHRGFLGCGH
FSAANDWLAALGQPTIDWLRPQAD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgccgcgccgatccggcccaggccacgctcttcgacgaacccgccggcgtgccg
atggccacgggcggcttcatcccgctggcccaccagttcgatgcactgcccgccgactgg
aaagcgctgcttgagccttgcctggcgcggaccgactggccggcactgtgcgcgttcgtc
gacggcgaacgcgcggccggcaagccgatcttcccgaccgaggtcttccacgccctgcac
ctgacgccggtcgacgatgtgcgcgtggtcatcctcggccaggatccataccacggcacc
ggcacggtcgacggccgcgaggtgccgcaagcgcacgggctggcgttctcggtgcccgcc
ggcgtgcgcgtgccgccgagcctgcgcaacatctacaaggaaatcgaggcggaatacgac
cgcaagctgcccgccggctcgggcaacctggaaggctgggcgcaacaaggcgtgctgctg
ctcaacacggtgctgaccgtcgaacagggccaggccgccagccacgccaggcgcggctgg
gaacgcatcaccgactgcctgctggagcacctggcgcgcgtcgggcaccggcgcgtattc
atgctgtggggcagccacgcccaggccaaacgcgccttgctgccggagggccatctggtg
ctcgaggcaccgcacccgtcgccgctgtcggcgcatcgcggcttcctggggtgcgggcat
ttcagtgccgccaacgactggctggcggcactggggcagccgacgatcgattggctgcgg
ccccaggcggactga
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