Ralstonia solanacearum PSI07: RPSI07_2157
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Entry
RPSI07_2157 CDS
T01273
Symbol
hfq
Name
(GenBank) RNA chaperone Protein hfq, post-transcriptional regulator
KO
K03666
host factor-I protein
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl02024
Quorum sensing
rsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPSI07_2157 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPSI07_2157 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsl03019
]
RPSI07_2157 (hfq)
03036 Chromosome and associated proteins [BR:
rsl03036
]
RPSI07_2157 (hfq)
Messenger RNA biogenesis [BR:
rsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPSI07_2157 (hfq)
Chromosome and associated proteins [BR:
rsl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RPSI07_2157 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
CBJ51522
LinkDB
All DBs
Position
complement(2261575..2261814)
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AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFRVDEATDA
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgctacaagacccgtttctgaatgcgctgcgtaaggagcat
gtgccggtgtcgatctatctcgtcaacggtatcaagctgcaaggcaatatcgagtcgttc
gaccaatacgtcgttctgctgcgcaataccgtcacgcagatggtgtacaagcatgcgatt
tccactgtggtgccggcgcgtgccgtgaatttccgcgtggatgaggccaccgacgcctga
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